Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4691 |
Symbol | |
ID | 3912509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5307665 |
End bp | 5309353 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886596 |
Product | hypothetical protein |
Protein accession | YP_488285 |
Protein GI | 86751789 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTT TCGCTTCGAC CACGGCCATG CTGATACTGG CCGCCACAAC CGCAGCCGCC GCCGATCTGC CGCGGTTGCC TTTGTCCCCG GCCGCGCCAG TGCAGTGGAG CTGGACCGGC CTGTATTGGG GCGCGCATCT CGGCGGCAGC TTCGGGCAGA CCAGCTTCAG CGATCCCGCC GGTCCCGGCC TCTATGGCGG CCAGGTCCGC AGCCCGGCGG CGCTTGCCGG CATTCAGCTC GGCTACAATT ATCAACCCAA CAGGAACTGG CTGATCGGTG TCGAGGCCGA TGTCAGCGCG ATGAACGGCA ACGGCACGCA GAGCTGCCTG GTCTCCTCCG GCCTGTTCAT CTCGGCGAAC TGCCGCGTCC GCCAGGACGC ACTGGCCACG CTCACGGGCC GCGCCGGCTT CGTGACCGGC CCCGGCGGCC GAACGTTGCT CTACGCCAAA GCCGGCGCCG CCTTTCTCAG TGAACGGCTC GACATCACCA TCGGCAATCC GATCGGATCG TCGACCGAGA GCACTGACGG CCGCTGGGGC TGGACCGCGG GCGCCGGCAT CGAGCGGGCG CTGGCGCCGG CCTGGTCCGT CAAGTTCGAA TACGACTACG CGAATTTCGG CAGCCGCGAC ATGGCGACGC CGTCGAGCTA CCGGCTGGTG CCGGGCGTCG ACTATTTCGC CACGCCGCAG GGCGTCAGCA AGGTCAGCCA GGACCTGCAC GCCGTGAAGG TCGGCCTCAA TCTCAAATTC GGCGGCGACG TCGACGCCCG CTTCGACGAC TATCATCTGC GCGGCACGCA GGCGGCGGAC GATCGTGTCG AGCGCGGCGC GGTCGAGGTC GGCGGCCGGG TCTGGTACTC TTCGGGCCGG TTCCAGAAAG ACCTCGGCGC GACCGTCAAT CAGGGCCAGC AGAACATCCT GATCTCGCGG CTGACCTATC AGAGCACGGC GGCGTCGGGC GAAATGTTCG GCCGCGTCGA CGGACCCTAC GACACCTTCC TCAAGGGCTT CGCCGGCGGC GGTACGCTCG TGAGCGGCAA CATGCATGAC GAGGACTGGA TCGCCAATGA CGGCATCCCG TATTCGAACA CGCTGCACGA CCCGGTGAAG GGCAGCATCG CCTATGCGAC GCTCGACGTC GGCTACAATC TGCTGCGCGG GTCGGACTAC AAATTCGGCG GCTTCGTCGG CTACAACTAC TATCGCGAGA ACAAATCGGC CTATGGCTGC GTGCAGACCG CCGGCGCGAC CGCGTCCCAG ATCTGCGGCT CGCCGATCTC GAATGCCGTT CTCGCCATGA CCGAAAACGA CACCTGGCAT TCGCTGCGGG TCGGCTTCAA CGGCGAGCTC GGACTCGGCC GCGGATCGAA ACTCTCCGCC GACGCGGCCT ATCTGCCCTA TGTGAAGATG TTCGGAACCG ACAATCACGT GATGCGCACC GACGTCACCG ACACCGTCTC GCCGGAACAG GGAACCGGGC AGGGCGTGCA GCTCGAGGCG ATCCTGTCGT ATCAGGTCAC GAACGCCTTC AGCGTCGGCG CCGGCGCGCG CTACTGGGCG ATGTGGGCGA CCACCAACGC CTACACCAAC ATCTTCGGCT CGGAGTGTCC CTGCCAGACC CTGCCGACGC GTACCGAACG CTACGGAACC TTCCTGCAGG CGGCCTACAA GTTCGATGCG CCGCGATAG
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Protein sequence | MRLFASTTAM LILAATTAAA ADLPRLPLSP AAPVQWSWTG LYWGAHLGGS FGQTSFSDPA GPGLYGGQVR SPAALAGIQL GYNYQPNRNW LIGVEADVSA MNGNGTQSCL VSSGLFISAN CRVRQDALAT LTGRAGFVTG PGGRTLLYAK AGAAFLSERL DITIGNPIGS STESTDGRWG WTAGAGIERA LAPAWSVKFE YDYANFGSRD MATPSSYRLV PGVDYFATPQ GVSKVSQDLH AVKVGLNLKF GGDVDARFDD YHLRGTQAAD DRVERGAVEV GGRVWYSSGR FQKDLGATVN QGQQNILISR LTYQSTAASG EMFGRVDGPY DTFLKGFAGG GTLVSGNMHD EDWIANDGIP YSNTLHDPVK GSIAYATLDV GYNLLRGSDY KFGGFVGYNY YRENKSAYGC VQTAGATASQ ICGSPISNAV LAMTENDTWH SLRVGFNGEL GLGRGSKLSA DAAYLPYVKM FGTDNHVMRT DVTDTVSPEQ GTGQGVQLEA ILSYQVTNAF SVGAGARYWA MWATTNAYTN IFGSECPCQT LPTRTERYGT FLQAAYKFDA PR
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