Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4666 |
Symbol | |
ID | 3912484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5278875 |
End bp | 5280611 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886571 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_488260 |
Protein GI | 86751764 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACC AGGACGATAT CCTCCAGCTG ATCGAAGATA CCGAGCCCGG GCCCGAGCCG TCGAACACCA AGCGGTGGAA GATCGCGGTG ATCGACGACG ATCCCGCCGT CCACGAGGGC ACCCGCTTCG CGCTCAGCGA CTACAATCTC AACGGCCAGA CCCTGGAAAT CCTCTCGGCC TATTCGGGCG CCGAGGGCCG CGAACTGATG CGGGCCAATC CCGACATTGC CGCGGTGCTG CTCGACGTCA TCATGGAGTC GGACGCGGCC GGGCTCGAAC TGGTCGAGTT CATCCGCAAC GAGATGCGCA ACGAGACCGT TCGCATCATC CTGCGCACCG GCCAGCCGGG CCAGGCGCCG GAACGCCGGG TGATCGTCGA CTACGACATC AACGACTACA AGGCCAAGAC CGAGCTCACC GCCGACAAGC TGTTCACGTC GCTGACCGCC GCACTGCGCA GCTACCAGCA ACTGGAGCGG ATGGTGCAGA CGCGGCGCGG GCTCGAGATC ATCATCGACG CCGCCTCCAC GTTGTACGAT TTCAAATCGA TGCAGCGGCT GGCCGAAGGC GTGCTGACCC AGATCGCCTC GCTGCTCAAT GTCGACTGCG CGGGAATCCT GGTGCTGCGC GACGCCGGCG ACGATTTTTC GGTGCTGGCC GGCTCCGGCT GTTACAGCCG CTTCATCGGT TCGGCCGGTA TCCGGCCGCT CGATCAGGAC CTGCGGCAAA TGGTCGAGGA GGCGTTCCGA CGCCGCAAGC ACGAATTCGC CGATCAACGC ACCGTGCTGT ATGTCCGGAC CGGCAGCGGG CGCGAGGTCG TGGTGCTGCT GCAGGCCGAG CGTGAACTCA CCGACACCGA CCGCTCGCTG GTCGAGATTT TCGGTAGCCG GCTGTCGATC GCATTCGACA ATGTGATCCT CTACAAGCAG CTCCACGAGG CCAACACCCA GCTCGAGGAC CGGGTCGCGC AGCGCACCCG CGCGCTGACC CAGGCCAATC GCCGGCTGTC GACGCAATGG ATGCGGTTGC AGCGCGCCAA CGCCTTCAAG AACGAGATTC TCGGCACCGT CGCCCACGAC CTGAAGAATC CACTTGGCGT CATCCTCGGC CGCACCGAGA TGCTGACCGA ACTGATCGGC GCCGATTCGC CCAAGGAAAA CGTCATCGCC CAGGTCGATC ACATCCGCGA GGCGACGCGG CGGCTGACCT CGATGGTGGA CCACCTGATC TCAGATGCGA TGGCCGACGC CTTCGACATT TCGATCCGGC GCGAGGCGGT CGATCTCGCC GCATTGGTCG CCGAAGTGGC CGAGGCCAAC CGGCCGATGG CGCAGAACAA GCAGCAGGCG ATCTCGGTGT CGATCCCCGA CGCCCGGATG ACGATGTGCG ACGCCGATCG GGTGCGCGAG GCGATCGACA ATCTGGTCAG CAACGCCATC AAATACAGTC CGATCGGCGG CAAGATCGCG CTGCAGGTCG ACGGCGACGA CGCCAACACC GTCGTCCGCG TCACCGACGA GGGCGCCGGC CTGTCGCCGG AGGATCTGAG CCGGCTTTTC GGCCGGTTCC AGCGCCTCTC CGCCAAGCCG ACCGCCGGCG AGAGCTCGAC CGGGCTCGGC CTGTCGATCG TCAAGAAGAT CATCGACATG CACGGCGGCA ATGTCGGCGC CCACAGCCCC GGCCCTGGCC AGGGCGCGAC CTTCACCATC ACCCTGCCCG CATCGCCCGC ATCATGA
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Protein sequence | MADQDDILQL IEDTEPGPEP SNTKRWKIAV IDDDPAVHEG TRFALSDYNL NGQTLEILSA YSGAEGRELM RANPDIAAVL LDVIMESDAA GLELVEFIRN EMRNETVRII LRTGQPGQAP ERRVIVDYDI NDYKAKTELT ADKLFTSLTA ALRSYQQLER MVQTRRGLEI IIDAASTLYD FKSMQRLAEG VLTQIASLLN VDCAGILVLR DAGDDFSVLA GSGCYSRFIG SAGIRPLDQD LRQMVEEAFR RRKHEFADQR TVLYVRTGSG REVVVLLQAE RELTDTDRSL VEIFGSRLSI AFDNVILYKQ LHEANTQLED RVAQRTRALT QANRRLSTQW MRLQRANAFK NEILGTVAHD LKNPLGVILG RTEMLTELIG ADSPKENVIA QVDHIREATR RLTSMVDHLI SDAMADAFDI SIRREAVDLA ALVAEVAEAN RPMAQNKQQA ISVSIPDARM TMCDADRVRE AIDNLVSNAI KYSPIGGKIA LQVDGDDANT VVRVTDEGAG LSPEDLSRLF GRFQRLSAKP TAGESSTGLG LSIVKKIIDM HGGNVGAHSP GPGQGATFTI TLPASPAS
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