| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4614 |
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| Symbol | |
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| ID | 3912431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5213725 |
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| End bp | 5214945 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637886518 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_488208 |
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| Protein GI | 86751712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAC GCCCGAATTC CGTTTTCGCG TCGGCAGCCG CGGTGGCCGC GGTTATGCTT
GCGGCCACAT CGGCTGCAGC GGCGGAGAAG AAATACGATC CCGGCGCCAG CGACACTGAA
ATCAAGATCG GCCAGACCGT GCCGCATTCG GGTCCCGGTT CGCTCTATGG CGTGCTCGGC
CGCGTCGGCG AAGCCTATTT CCAGATGCTG AACGACAAGG GCGGCATCAA CGGCCGCAAG
GTCAAATTCC TGACCCTGGA CGATTCCTAC AGCGCGCCGA AGGCGGTCGA AGCCACCCGG
CGGCTGGTCG AGCAGGAAGA GGTGCTGGCG CTGTACGGCT CGCTCGGCAC CGCGCCGCAG
ACGGCTGTCC ACAAATATCT CAACAACAAG AAGGTGCCGC AGCTGCTGCT GAACACCGGC
GCGTCGAAAT GGAACGACCC GAAGAACTTC AAATGGACCA TGGCGGGTCT GCCGCTCTAT
CCGACCGAGG CGCGGATTCT CGCCAAATAC GTGCTCAGCG TGAAACCGGA CGCCAAGATC
GCGATCCTCT ATCAGAACGA CGATTTCGGC CGTGACTTCC TCGGCCCGTT CAAGAAGGTT
TTGGAAGACG CCGGCGGCAA GGCCAAGGTG ATCGCCGAGG CCAGCTACGA TCTGACCGAG
CCGACCATCG ACTCGCAGAT GATCAATCTG TCGAAATCCG GCGCCGACGT GTTCTACAAC
ATCACCACCG GCAAGGCGTC GTCGCAGTCG ATCCGCAAGG TCGTGGAACT CGGCTGGAAG
CCGCTGCAAC TGCTGTCGGC CGGCTCGACC GGGCGCTCGA TTCTCGAGGC CGCAGGCCTC
GACAACGCCA AGGGGATCGT GGCGATCGCC TATACCAAGG ACATCGGATC GCCGAAATAC
GCCGGCGACC CCGACGTGAT GGCGTTCGAG GAATTGCGCA AGAAGTACCT GCCGAACGTC
ACGCCGGACA ATTCGATCGC GTTCTCCGGC TATGCGCAGG CCGCCGCCAT GGCGGAAATT
CTGCGCCGCT GCGGCGACGA TCTGACGCGT GAAAACGTCA TCAAGCAGGC GTCGATGCTG
GGCGGATTCC GCGCTCCGCA CATGCTGCCC GGCGTGAGCT ACTCCTACAA GCCGGACGAC
TACACTTCGA TCAAGACGCT CTACACGATG GAATTCAGCG GCAAGGACTG GATCGTGTCC
GACAAGCCGG TCGCTGAATA A
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| Protein sequence | MNLRPNSVFA SAAAVAAVML AATSAAAAEK KYDPGASDTE IKIGQTVPHS GPGSLYGVLG
RVGEAYFQML NDKGGINGRK VKFLTLDDSY SAPKAVEATR RLVEQEEVLA LYGSLGTAPQ
TAVHKYLNNK KVPQLLLNTG ASKWNDPKNF KWTMAGLPLY PTEARILAKY VLSVKPDAKI
AILYQNDDFG RDFLGPFKKV LEDAGGKAKV IAEASYDLTE PTIDSQMINL SKSGADVFYN
ITTGKASSQS IRKVVELGWK PLQLLSAGST GRSILEAAGL DNAKGIVAIA YTKDIGSPKY
AGDPDVMAFE ELRKKYLPNV TPDNSIAFSG YAQAAAMAEI LRRCGDDLTR ENVIKQASML
GGFRAPHMLP GVSYSYKPDD YTSIKTLYTM EFSGKDWIVS DKPVAE
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