| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4560 |
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| Symbol | |
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| ID | 3912377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5154398 |
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| End bp | 5155114 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886464 |
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| Product | outer membrane protein |
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| Protein accession | YP_488154 |
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| Protein GI | 86751658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.400354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TCCTTCTCGG CACCGTTGCT CTGGTTGCCC TCGGCGCGGC TCCGGCCCTC
GCCGCCGACC TCGCGGCCCG CCCGTACAAC AAGGCCCCGG TCTACGCGCC GCCGGCCCCG
ATCTATAACT GGACCGGCTT CTACATCGGC GGTCACATCG GCGGCGCCTT CGCCGGCGAC
AACTCGATCG GCACCGGCGT CACCGCCGGC AGCGACGGCA AGTTCCTCGG CGGTGTGCAG
GTCGGTTACG ACTGGCAGTT CGCTCCGAGC TGGGTGCTCG GCGTCGAAGG TCAGTACTCC
TGGCTGAGCG GCACCAACGA CGCGGTCAGC TTCACGGTCC CCGGCGTTGC CGGCACCTAC
ACCTACGCCG ACAACCAGCG CGGTCTGGCT TCGGTCACCG GTCGCCTCGG CTACACCTGG
GGTCCGGCAC TGCTCTACGT CAAGGGCGGT TGGGCCTATG CCGACTACAC CAGCAGCCTG
ACGCTGAGCG GCGTCGGCAC CGTCTCGTCC ACCAGCAGCC AGGACGGTTA CACCGTCGGC
GGCGGTCTCG AGTACCTGTT CGCCCAGAAC TGGTCGGGCA AGATCGAATA TCAGTACTAC
GACTTCGGCA ACGTCGATCT GGGCGCTGGC TTCACCGCCA AGAACGACCA GCACGTCGTC
AAGGCCGGCC TGAACTACCG CTTCAACTGG GGTGGCCCGG TCGTCGCCAA GTACTGA
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| Protein sequence | MKKFLLGTVA LVALGAAPAL AADLAARPYN KAPVYAPPAP IYNWTGFYIG GHIGGAFAGD
NSIGTGVTAG SDGKFLGGVQ VGYDWQFAPS WVLGVEGQYS WLSGTNDAVS FTVPGVAGTY
TYADNQRGLA SVTGRLGYTW GPALLYVKGG WAYADYTSSL TLSGVGTVSS TSSQDGYTVG
GGLEYLFAQN WSGKIEYQYY DFGNVDLGAG FTAKNDQHVV KAGLNYRFNW GGPVVAKY
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