| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4543 |
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| Symbol | |
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| ID | 3912360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5137495 |
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| End bp | 5138691 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886447 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_488137 |
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| Protein GI | 86751641 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.47672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.619069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGC GCGCGATGAA GTCTCGCACA TGCCTGGCGT TCGGCCTGCT CGCCGTCGCC
GCACTGCTCA CACTGGGTGA CGCCACGCTG CACAGCGCGC TGGCGCAGAA TCCGTTCGGC
GCGCCGAAGG CCGCCGCCGA GCCGCAGGCC GGCGGGATCA TCGGCTGGCT GCTGGCGCAG
CAATCGGCGT TCTATCGGCA GATGTCGGCG ACGATTCGCG CCGCCAAGGC GGACGGCAGC
GCGGTCTGGA CGCTGCTCGG CATTTCGTTC GCCTACGGCA TCTTCCATGC CGCCGGCCCC
GGCCACGGCA AGGCGGTGAT CTCGTCCTAC ATGATCGCCA ATGAAGAGAC CGCGCGGCGC
GGCATCGTGC TGTCGTTCGT CTCGGCGCTG ATGCAGGCGC TGGTCGCGGT GCTGATCGTC
GGGATCTGCG CCTGGCTGCT CAACGCCACG GCGAAGACGA TGTGCAGCGC CGAACGGGCG
ATCGAGATCG GCAGCTACGC CCTGATCGCC CTGTTCGGCG CGCGGCTGGT GTGGAGCAAG
GGCGGCGGGT TCTTTCGCGC GCTGCAGGGC AGCATGCGCA AGCCGGGCCT GGCGCTGGCC
GGCGTCCCGG CAATGGCCCC CGCCGGCGCG GCGTCCCATG ATCACGATCA CGCGCACGGC
CACAGCCATT CGCATCCGCT GCAGGCCCAT GCCGGCCACG ACCATCACGA TCACGGCCAT
AGTCATGGCC ACGATCATGC TCACGCGCAC GATCATCATG GTCATGATCA CGCCCATGAC
CATGCGCATG CCCACGACGA ATCCTGCGAC CATTGCGGCC ATTCGCATGG TCCGACGCCC
GCGGAACTCG CCGGCCCGGG CGGCTGGCAG CGCGGCCTCG GTGCGGTGCT GACGGTCGGC
ATCCGGCCGT GCTCGGGCGC GATCCTGGTG CTGGTGTTCG CGCTGGCGCA GGGCATGTTC
TGGGCCGGGA TCGCCGCGAC CTTCGTGATG GGGCTCGGCA CCGCCATCAC CGTGGCGACC
ATCGCCACGA TCGCGGTATC CGCCAAAGGC GTGGCGCGGC GGCTTGCCGC GGGTCACGCC
GGCGCCGGAG CGCTGGTCAT GCGTGGCGTC GAATTCGGCG CAGCCGGGCT GGTGCTGCTG
TTCGGCATCG GGCTTCTACT AGGTTACGTT GCAGCCGAGC GCGTGACCTG TCTTTAA
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| Protein sequence | MPLRAMKSRT CLAFGLLAVA ALLTLGDATL HSALAQNPFG APKAAAEPQA GGIIGWLLAQ
QSAFYRQMSA TIRAAKADGS AVWTLLGISF AYGIFHAAGP GHGKAVISSY MIANEETARR
GIVLSFVSAL MQALVAVLIV GICAWLLNAT AKTMCSAERA IEIGSYALIA LFGARLVWSK
GGGFFRALQG SMRKPGLALA GVPAMAPAGA ASHDHDHAHG HSHSHPLQAH AGHDHHDHGH
SHGHDHAHAH DHHGHDHAHD HAHAHDESCD HCGHSHGPTP AELAGPGGWQ RGLGAVLTVG
IRPCSGAILV LVFALAQGMF WAGIAATFVM GLGTAITVAT IATIAVSAKG VARRLAAGHA
GAGALVMRGV EFGAAGLVLL FGIGLLLGYV AAERVTCL
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