Gene RPB_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4438 
Symbol 
ID3912253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5027166 
End bp5027486 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content67% 
IMG OID637886341 
ProductSpoVT/AbrB-like 
Protein accessionYP_488033 
Protein GI86751537 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.844975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC CCGCCAGCAA GTCCGGCACT GCACGTCGCA ACGCCAAGGG AGCGCCCGGA 
CCGGACGCGC CGGCGACCGC GAAGCTTTTC ATGCATGGCC GCAGCCAGGC CGTGCGGCTG
CCCAAGGAGT TCCGCTTCGA GGGCACCGAG GTGCGCGTCC GCCGGGTCGG CGACAAGGTG
ATCCTGGAGC CGATGGAGAA GAAACCGTTC GATTACGCCG CTTGGCGCGC GCGGCTGGAT
GCACTCGGCG CGCGAGATTT CCTCGCCGAT GGCATGCCGG ACGATCCGTC GGTCCAGCCC
GAAGATTTCG GGATCGATTG A
 
Protein sequence
MSSPASKSGT ARRNAKGAPG PDAPATAKLF MHGRSQAVRL PKEFRFEGTE VRVRRVGDKV 
ILEPMEKKPF DYAAWRARLD ALGARDFLAD GMPDDPSVQP EDFGID