| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4215 |
|---|
| Symbol | |
|---|
| ID | 3912023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4787696 |
|---|
| End bp | 4788799 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637886118 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_487817 |
|---|
| Protein GI | 86751321 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.611478 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA TTGACCTCGT GGACCTGGCT CACTCCTACC TCGTCGGCGA CGATCTGCCG
CCGGCTGCCT ATGCGCTGAA GCCGGTATCG ATGACCTGGC GGCAGGGCGG CGCCTATGCA
CTCCTCGGCC CCTCCGGCTG CGGCAAGACC ACGCTGCTCA ATCTGATTTC CGGCATCGTG
ACGCCGTCGC GCGGCAAGAT CCTGTTCGAC GGCACCGACG TCACGCGGCT GTCGACCCGC
GAGCGCAACA TCGCGCAGGT GTTCCAGTTT CCGGTGATCT ACGACACCAT GACGGTGCGG
GAGAATTTGG CGTTTCCGCT GAAGAATCGC GGCGTGCCGA AGCCTGAGAT CGACAGGCGC
GTCGCCGAGA TCGCCGATCT GCTCGACCTC ACGCCGAATC TGGGGCGCAA GGCGACGCGG
CTGACCGCCG ACGCCAAGCA GAAGATCTCA CTCGGCCGCG GCCTGGTCCG CTCCGACGTC
GCCGCGATCC TGTTCGACGA ACCGCTCACG GTGATCGATC CGCATCTGAA GTGGGAGTTG
CGCTCCAAGC TGAAGGCGCT GCATCGCGCG CTGGATCTCA CGATGATCTA CGTCACCCAC
GACCAGACCG AAGCGCTGAC CTTCGCCGAC ACCGTCGTCG TCATGCATGA CGGCCGTGTG
GTGCAAAGCG GCACGCCGGA GGAACTGTTC GAGAAGCCGG CGCACACCTT CGTCGGTTAC
TTCATCGGCT CGCCCGGCAT GAACATCGTG CCGGCGCAGA TCCGCGGCCG CGAGGCGCTG
ATCGACGGCC ATGCGATCAC ACTCGCCCGC GGCTACGACA ATCTGCCATC CGGGGCCAAG
ATCGAGATCG GGGTGCGGCC GGAATTCGTG CACCTCACCG CGAAGGCGCC GGGGTTTTTG
TCCGGCCGCA TCGAGCGGAT CGACGACCTC GGCCGCATCC GTTTCGCCTG GGTGCGGGTC
GGCGGCGTCC GCTTCGCCGC GCGGGTCCCG GACGGATTCT CCGCCGACGG CGACGAGGTC
GGTCTGATGA TCGAACCGTC GCGCGTCCAC GTCTATGCCG ACAGCGAGAT CGTCGAAGGA
AGCGCGCTGG AGCAGGTCGC CTGA
|
|---|
| Protein sequence | MARIDLVDLA HSYLVGDDLP PAAYALKPVS MTWRQGGAYA LLGPSGCGKT TLLNLISGIV
TPSRGKILFD GTDVTRLSTR ERNIAQVFQF PVIYDTMTVR ENLAFPLKNR GVPKPEIDRR
VAEIADLLDL TPNLGRKATR LTADAKQKIS LGRGLVRSDV AAILFDEPLT VIDPHLKWEL
RSKLKALHRA LDLTMIYVTH DQTEALTFAD TVVVMHDGRV VQSGTPEELF EKPAHTFVGY
FIGSPGMNIV PAQIRGREAL IDGHAITLAR GYDNLPSGAK IEIGVRPEFV HLTAKAPGFL
SGRIERIDDL GRIRFAWVRV GGVRFAARVP DGFSADGDEV GLMIEPSRVH VYADSEIVEG
SALEQVA
|
|---|
| |