| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4177 |
|---|
| Symbol | |
|---|
| ID | 3911985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4749377 |
|---|
| End bp | 4749796 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886081 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_487780 |
|---|
| Protein GI | 86751284 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.378927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGGA TCAGCCGCAA TCTTGCGATC GACGACGACG ACATCGAGAT CAGCTTCGTG
CGCGCGTCCG GCCCCGGCGG CCAGAACGTC AACAAGCTGT CGACCGCCGC CCAGCTCCGC
TTCGACACGA CCAAAATCGC GCTGCCGGAG GACGCCGCGC TGCGGCTGAT CAATCTGGCC
GGCCAGCGCA TGACCAAGGA GGGCGTCATC GTCATCCACG CCCAGCGCTT CCGCACCCAG
GAGCGCAACA AGGCGGATGC GATCGACCGG CTGCTCGAAT TGCTCCGCGC CGCGATGGTG
CGGCCGATCC CGCGCCGCGC GACCCGCCCG ACGCTCGGCT CCAAGAAGCG CCGCCTCGAA
GGCAAGAAGC ACCGCGGCGA CATCAAAGCC GGCCGCAGCG GCAAGAGCTT CGACGATTGA
|
|---|
| Protein sequence | MLRISRNLAI DDDDIEISFV RASGPGGQNV NKLSTAAQLR FDTTKIALPE DAALRLINLA
GQRMTKEGVI VIHAQRFRTQ ERNKADAIDR LLELLRAAMV RPIPRRATRP TLGSKKRRLE
GKKHRGDIKA GRSGKSFDD
|
|---|
| |