Gene RPB_4132 details

Gene Information

• Locus tag: RPB_4132
• Symbol: dnaG
• ID: 3911940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris HaA2
• Kingdom: Bacteria
• Replicon accession: NC_007778
• Strand: -
• Start bp: 4705991
• End bp: 4708042
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637886036
• Product: DNA primase
• Protein accession: YP_487735
• Protein GI: 86751239
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTTCA CGCCGCAATT TCTCGACGAG TTGAAAGCCC GGCTGCTGGT GTCGGAGGTG 
GTCGGCCGCC GGGTCAAGCT GAAGAAGGCC GGGCGGGAGT GGAAGGGGCT TTCGCCCTTT 
CAACAAGAGA AGACGCCGTC GTTCTTCGTC AATGACGAGA AGCAGGCCTG GTTCGACTTC 
TCCTCCGGCA AGAACGGCTC GATCTTCGAC TTCATCATGC AGACCGACGG GGTGGATTTC 
CCCGAAGCGG TCGAGCGGCT CGCCGCGATG GCGGGCCTCG CCTTGCCGGC CGCGACGCCC 
GACGCCGCGC GCCAGGAGCA GCGCCGCCGC TCGCTGTACG ACGTCATGGA AATGGCGGCG 
GTGTATTTCT CCGAGAATCT CGCCTCGCGC GCCGGCGCCC GGGCCCGCGG CTATCTCGCC 
GATCGCGGCA TCCTGCCGTC GACCCAGGTC AAATTCCGCA TCGGCTATGC CTCGCCGGAT 
CGCTTCGCGC TCAAGGAGCA TCTCGGCAAG CACGGCGTGT CGGTCGACGA CATGGTCGAG 
GCCGGGCTGT TGTCGGCCGG CGACGACATC CCGGTGCCGT TCGACAAGTT TCGCGACCGG 
GTGATGTTTC CGATCACCGA CATCCGCGGC CGGGTGATCG CCTTCGGCGG TCGCGCGCTG 
GAGAAGGACG TCGCGGCGAA GTATCTGAAC TCGCCGGAAA CCCCGCTGTT TCACAAGGGC 
GACAACCTCT ACAACCTCGC CACCGCGCGC AAGGCGGCGC ATGACGCGGC CGGCAAGTCG 
ACGCCGACCG GCGCCGCGTC GGTGATCGTG GTCGAGGGCT ATATCGACGT CATCGCCATG 
GTCACGGCGG GCTTCGCAGC CACCGTCGCG CCGCTCGGCA CCGCGCTGAC CGAGAACCAG 
CTTCAGCTGC TGTGGAAGAT GGCGGACGAG CCGATCCTGT GTTTCGACGG CGACCGCGCC 
GGCCAGAAGG CGGCATATCG CGCCGCCGAT CTGGCGCTGC CGCATCTCAA GCCCGGCAAG 
AGCCTGCGCT TCGCCCTCTT GCCCGAGGGC CAGGATCCCG ACGATCTCGC CCGCGCCGGC 
GGGCGGCTAG CGATCGAGGA GGTGATCGGC GCGGCGCGGC CGCTGGCCGA CCTGCTGTGG 
TCGCGCGAGG CCGAAGGCGG CAGTTTCGCC ACGCCGGAGC GGCGCGCGGC GCTGGAGGCG 
CGGATCAACG AGCTCGCCAA CGGCATCCGC GACGAGGTGG TGCGGCGCTA CTATCGGAAG 
GACTGGGCCG AGCGGCTGCG CGCGGCCTTC GCGCCGCAGG GTGGCTTCGG CGGAGGGTTC 
GGCGGAGGCT TCCGGGCCGG CGGCGGCGCG CGCGGTGGTG CTGATTCGGG GCGCCGGTTT 
CAGCCGCGCG GGAGTTTTCC ACAGGGCGGC GGCCGTTATG CACCGTTCGG CCGGCAGACC 
GGCCTCAGTT CGCCGCCGCA GGGGCGCGGG CCGTATCAGG TCGCAAGCCC CGATCTGGCG 
TCGAGCCCGA TCATGCGCGG GCAGCGCAGC GCGCTGTCGC GCCGCGAGGC GCTGATCCTG 
CAATCGCTGC TCAACCACCC CTGGCTGCTG CACGATCATC TCGAAGAAGT CGCGGCGCTG 
GAATTCGCCC ATCCGGAGGC GCACCGGCTG CGCGCGGCGA TCATCGCCGC CTTCGCGGCC 
GACCATCATC ACGGCGACGA TCCGGCCGGA CAGTCCGAGA AACTTCGCGC CGATCTCGCG 
AAGGCCGGTT TATCCGAGCA ATTGCAACGG CTTGAACGCG CGATCACGAC CCACGCGGTG 
TGGGGCGCGG GGCCGGACGC GGCGCCCGAG GACGTTCTTT CGACGTGGCA GCAACTCGTT 
GCCTTGCATC GACAATCTCA CTCCTTACTT AGGGAGCTGA AGGATGCCGA GCTGGCTTTG 
GGTGAAGACG GCAGCGAGGC CAACGTCGCC TGGTTGAGGG ACGTCAAGGC GCGGCTCTCG 
GAAGTGGAAG GGACTGAGGC GCTGATCGAG GGGTTCGGCC AGTCATCGGG CCGGTTCCAT 
CGGAGCGTGT GA 

 

Protein sequence

MRFTPQFLDE LKARLLVSEV VGRRVKLKKA GREWKGLSPF QQEKTPSFFV NDEKQAWFDF 
SSGKNGSIFD FIMQTDGVDF PEAVERLAAM AGLALPAATP DAARQEQRRR SLYDVMEMAA 
VYFSENLASR AGARARGYLA DRGILPSTQV KFRIGYASPD RFALKEHLGK HGVSVDDMVE 
AGLLSAGDDI PVPFDKFRDR VMFPITDIRG RVIAFGGRAL EKDVAAKYLN SPETPLFHKG 
DNLYNLATAR KAAHDAAGKS TPTGAASVIV VEGYIDVIAM VTAGFAATVA PLGTALTENQ 
LQLLWKMADE PILCFDGDRA GQKAAYRAAD LALPHLKPGK SLRFALLPEG QDPDDLARAG 
GRLAIEEVIG AARPLADLLW SREAEGGSFA TPERRAALEA RINELANGIR DEVVRRYYRK 
DWAERLRAAF APQGGFGGGF GGGFRAGGGA RGGADSGRRF QPRGSFPQGG GRYAPFGRQT 
GLSSPPQGRG PYQVASPDLA SSPIMRGQRS ALSRREALIL QSLLNHPWLL HDHLEEVAAL 
EFAHPEAHRL RAAIIAAFAA DHHHGDDPAG QSEKLRADLA KAGLSEQLQR LERAITTHAV 
WGAGPDAAPE DVLSTWQQLV ALHRQSHSLL RELKDAELAL GEDGSEANVA WLRDVKARLS 
EVEGTEALIE GFGQSSGRFH RSV