Gene RPB_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4127 
Symbol 
ID3911935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4699998 
End bp4700501 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID637886031 
ProductNUDIX hydrolase 
Protein accessionYP_487730 
Protein GI86751234 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0317777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTGTC TGCCCCCGGG GTCTGCCATA AAGCCTCGGT CGGAGAAGAC GATGGCTGTA 
CGTGGATCGT TTCACGAAAA ACGTGAGGTT GCCGTGGCGA TAGTTGTTAG GCGCCACGAG
GGAAACACTT CTGTATTGAT GGTCCGCAGA GCGGACCCAA ATGAAAATTG CCCTAGGTGG
GTTTTCCCTG GAGGAAAAAT CGATGCGGGA GAAAGCGCTG GAGCAGCCGC AAAACGAGAG
CTAAAAGAAG AGACTGGGAT CGATGTATCG AGGCCCGATA TTATCGGATG TCGAATTCAT
CCTGTTTCCG GTCTGAAGAT TCACTATATT AGTTTTCAAT ATAAGCGCGG TCTGCCGCGA
ATCCGAGAAC CGAAGAAGCT TGATCAGATT GACTGGGTTA GTGTCGATTC CCTCGGCTCT
GTGGTCGGCC ATTCTCTGTT TGCTCCGGTT GAGGCTTTTT TGCAGAATAG TGATAGGTCC
GCTCAGGCGG ATTTTGGCGT GTGA
 
Protein sequence
MLCLPPGSAI KPRSEKTMAV RGSFHEKREV AVAIVVRRHE GNTSVLMVRR ADPNENCPRW 
VFPGGKIDAG ESAGAAAKRE LKEETGIDVS RPDIIGCRIH PVSGLKIHYI SFQYKRGLPR
IREPKKLDQI DWVSVDSLGS VVGHSLFAPV EAFLQNSDRS AQADFGV