Gene RPB_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4022 
Symbol 
ID3911829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4590420 
End bp4590917 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID637885926 
Producthypothetical protein 
Protein accessionYP_487626 
Protein GI86751130 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAC CCAGGCGCGA CGTGCCCGCG AACGGCCAGG AATCGGTGTG GGACTATCCG 
CGCCCGCCAC GGCTGGAGCC GGTTTCCGCG CGGCTGCGGG TGATATTCAA CGGCGAAACG
ATCGCCGACA GCATTTCGGG GTTTCGCGTG CTCGAGACCA GTCACCCGCC GGTCTACTAC
ATTCCGCAGA CCGATATCCG GATGGACCTG ATGCGCAAGG CGTCGGGGTC GTCCTGGTGC
GAGTTCAAGG GCGAAGCCCG CTACTGGTCG ATCGAGGCCG GCGACCGCCG CTCCGACAAC
GCCGCCTGGA GCTATCCATC GCCCTCCCCC GCCTTCGCGC CGATCGCCGA TCATCTCGCC
TTCTACGCGT CGCGAGTCGA CGCCTGCTTC GTCAGCGACG AGCGCGTGCA GCCGCAACAA
GGCGATTTCT ACGGCGGCTG GATCACCTCG CTGGTGGTCG GCCCGTTCAA GGGTGGCGCA
GGAACGCGCG GATGGTAG
 
Protein sequence
MFGPRRDVPA NGQESVWDYP RPPRLEPVSA RLRVIFNGET IADSISGFRV LETSHPPVYY 
IPQTDIRMDL MRKASGSSWC EFKGEARYWS IEAGDRRSDN AAWSYPSPSP AFAPIADHLA
FYASRVDACF VSDERVQPQQ GDFYGGWITS LVVGPFKGGA GTRGW