Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3976 |
Symbol | |
ID | 3911783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4539177 |
End bp | 4540610 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885880 |
Product | LhaA protein |
Protein accession | YP_487580 |
Protein GI | 86751084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.27032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.197279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA TGGCGGCGAC ATTGGCGAAA GGCTGGATGC GTCTCGGGAC GCGTTTCCTG CCGTTCGCCG ACGCGGCGAC GAAAGAGCTC CCGCTCGGCC GTCTGCTGCG CCTGTCGCTG TTTCAGGTCT CTGTCGGCGC TTCGGTGGTG CTGCTCAACG GCACGCTGAA CCGGGTGATG ATCGTCGAGC TCGGCGTCTC GACGCTGCTG GTCTCGCTGA TGGTGTCGCT GCCACTGATC TTCGCGCCGT TCCGCGTGCT GATCGGATTC AAGTCGGACA ACCACCGCTC GGTGCTGGGC TGGCGTCGTG TGCCTTATAT CTGGATGGGC ACGATGCTGC AGTTCGGCGG CTTCGCGATC ATGCCATTCG CGCTGCTGGT GCTGTCCGGC GGCGGCGAGT ATCCGGCGGT CTATGGTCAG ATCGGCGCTG CTCTGGCGTT CTTGCTTGTC GGCGCCGGGC TGCACACGAC GCAGACCGCC GGCCTTGCGC TCGCCACCGA TCTGGCGCCG GAAGAATCGC GGCCGCGGGT CGTCGCGTTC CTTTACGTGA TGCTGCTCGT CGGGATGACC GGCAGCGCGC TGCTGTTCAG CGAACTGCTC CGCGACTTCA GCGAGCTTCA ACTGATCCAG GTGATTCAGG GCGTCGCCGT CGCCCAGTTG CTGCTCAACA TCGCTGCGCT GTGGAAGCAG GAGGCGCGCA ATCCCGCGCT CACCTCGGCG ACCCGTCCGC GGCCGCAGTT CAATCAATCT TGGGCGCGGT TCCGCGCTGC CGGCGGTTCG AACCGGATGC TGGTCGCGGT CGCGCTCGGT ACCGCGGGAT TCTCCATGCA GGACATCCTG CTGGAGCCTT ACGGCGCCGA AGTGCTGAAG CTCTCCGTCG GTCAGACCAC GGCGCTGACC GCGTTTTTCG CGCTCGGCAC GCTGGCCGGC TTCGGCCTCG CGGCGCGGAC GCTCGGACGC GGCAGCGATC CGTATCGGAT CGCCGGCTTC GGCGCGCTGA TCGGCATCTT CGCGTTTGCG GCCGTCGCGC TGGCGGCGCC GGCGCAATCG GTTGTTCTGT TCCGGATCGG CACCGCGCTG ATCGGGCTGG GCGGAGGCCT GTTCGCGGCC GGCACGCTGA CCGCAGCGAT GCAGATCGGT TCCGACAGCG AACCCGGGCT CGCGCTCGGT GCCTGGGGCG CGGTGCAGGC CACCGCGGCG GGCGGCGGCA TCCTGCTCGG CGGCGGTCTG CGCGATTTGT TCGCTTCGCT CGCCGACAGC GGCATGCTCG GCGCCGTGCT GTCGGGGCCC GCGATCGGTT ACGGCTTCGT CTACAACATC GAGATCGCGT TGCTGTTCGC AACGTTGGTT GCGGTAGGTC CTCTCGTGCG GGTCGCACGG CCGAACTACG CGCAGCCTTC ATCCAAGTTC GGCCTAGCCG AATTTCCAGG TTAA
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Protein sequence | MSQMAATLAK GWMRLGTRFL PFADAATKEL PLGRLLRLSL FQVSVGASVV LLNGTLNRVM IVELGVSTLL VSLMVSLPLI FAPFRVLIGF KSDNHRSVLG WRRVPYIWMG TMLQFGGFAI MPFALLVLSG GGEYPAVYGQ IGAALAFLLV GAGLHTTQTA GLALATDLAP EESRPRVVAF LYVMLLVGMT GSALLFSELL RDFSELQLIQ VIQGVAVAQL LLNIAALWKQ EARNPALTSA TRPRPQFNQS WARFRAAGGS NRMLVAVALG TAGFSMQDIL LEPYGAEVLK LSVGQTTALT AFFALGTLAG FGLAARTLGR GSDPYRIAGF GALIGIFAFA AVALAAPAQS VVLFRIGTAL IGLGGGLFAA GTLTAAMQIG SDSEPGLALG AWGAVQATAA GGGILLGGGL RDLFASLADS GMLGAVLSGP AIGYGFVYNI EIALLFATLV AVGPLVRVAR PNYAQPSSKF GLAEFPG
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