| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3959 |
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| Symbol | |
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| ID | 3911766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4519260 |
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| End bp | 4521386 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885863 |
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| Product | oligopeptidase B |
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| Protein accession | YP_487563 |
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| Protein GI | 86751067 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAG ACCCGCTCAT GACCCTGTCC CCGCCCCGCG ACGCCACGCC TCCCGTCGCG
CCGCGCCGTC CGCACGCCTT CACCACCCAC GGCATCACCA TCAACGACGA CTATGCCTGG
CTGAAGGACC CGAACTGGCA GGAGGTGCTG CGCGATCCGG CGCTGCTCGA TCCCGATATC
CGCGCCTATC TCGAAGCCGA GAACGGCTAC ACCGACAGCG TGCTCGGCCA CACCGAGGCG
TTGCAGAAGA CGCTGGTTGC GGAAATGCGC GGGCGGATCA AGGAAGACGA TTCCAGCGTG
CCGCAGCCGG ACGGGCCCTA CGCTTACTTG CGCAAATTCC GCGAAGGCGG CCAGCATCCG
CTGTATGGCC GCACGCCGCG CGACGGCGGC GAACTCGACA TCATCCTCGA CGGCGACGAA
CTGGCGAAGG GCACCGAGTA CTTCCAGTTC GGCGGACGGC GGCATTCGCT CGACCACAAG
CTGGAAGCCT GGAGCGCTGA CGCCAAGGGC TCGGAATACT ACACCATCCG CGTGCGCGAC
TGGACGACGA AGCAGGATTT GCCCGACCTC GTCGAGGAGA CCGACGGCGG CGTGGTCTGG
ACCGCGGACT CGAGCGCGTT CTTCTACGTC AAGCTCGACG ACAATCATCG GCCGATGCAG
ATCTGGCTGC ACAAGCTCGG CACCGCGCAG GCCGACGACC TGCTGGTGTA CGAGGAGAAA
GACGCCGGCT GGTTCACCCA CATCCACGAG AGCAGCAGCG GACGGTTCTG CGTGATCGCC
GGCGGCGACC ACGAGACGTC GGAGCAGCGG CTGATCGACG TCTCCGATCC GACCGCGCCG
CCGCGGCTCG TCGCCGCGCG CGAACTCGGC GTGCAATATT CGCTCGCAGA TCGCGGCGAC
GAGCTGTTCA TCCTCACCAA TGCGGACGGC GCGATCGACT TCAAGATCGT CACCGCGCCG
CTGGCTTCGC CTGTGCGCGA CAATTGGCGC GATCTGATCC CGCATCGCGA AGGCATCTAT
ATCATCGACT TCGACCTGTT CTCCGGCCAC ATGATGCGGC TGGAGCGCGC CAACGCGCTG
CCGTCGGTGA CGATCCGCGA TCTCGCGAGC GGCGATGAGC ATGCCATCGC CTTCGACGAG
GCGGCCTACT CGCTGTCCGC CTCCGGCGGC TGGGAATTCG ACACCACGGT GATGCGGTTC
TCCTACTCGT CGATGACGAC GCCGTCGGAA GTCTACGATT ACGACATGGC GACGCGCGAG
CGGAGCTTGC GCAAGCGCCA GGAAATTCCC TCGGGCCAAA ATCCGGCAGA CTACGTCACC
ACCCGGATCA TGGCGAAGGC CGACGACGGC GCCGAGGTGC CGGTGTCGCT GCTGCATCGC
AAGGGGCTCG CGCTCGACGG CGCGGCGCCG CTGCTTCTGT ACGGCTACGG CTCCTACGGC
CACGCGATGC CGGCGGGCTT CTCCGCCAAC GCGCTGTCGC TGGTCGATCG CGGCTTCGTT
TACGCGATCG CGCATATCCG CGGCGGCGCC GACAAGGGCT GGGGCTGGTA TCTCGACGGC
AAGCGCGAGA AGAAGACCAA CTCGTTCGAC GATTTCGCCG CCTGCGCGCA GGCGTTGATC
GACGCCAAGT ACACGTCGGC GAAACGCATT GTCGCCCATG GCGGCAGTGC CGGCGGCATG
CTGATGGGCG CGGTCGCCAA CCGCTCGGGC GAGTTGTTCG CCGGCATCGT CGCCGAAGTG
CCGTTCGTCG ACGTGCTCAA CACCATGCTC GACGATACGC TGCCGCTGAC GCCGCCGGAA
TGGCCTGAAT GGGGAAATCC GATCAGCAGC GAAGCCGACT TCAAAACCAT CCTGTCCTAC
TCGCCCTACG ACAACGTCGC GGCGACGACC TATCCGGCCA TCCTCGCGAT GGGCGGCCTC
ACCGATCCGC GCGTCACCTA TTGGGAGCCG GCGAAATGGG TGGCGCGGCT GCGCGCGACC
ATGACCGGCG GCGGCCCCGT GCTGCTCCGC ATCAACATGG GCGCCGGCCA CGGCGGCGCG
TCCGGCCGGT TCAGCCGGCT CGACGAGGTC GCGATCGTCT ACGCCTTCGC CTTGTGGGCG
GTCGGCCTCG CGGATTCCGC TGCCTGA
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| Protein sequence | MQRDPLMTLS PPRDATPPVA PRRPHAFTTH GITINDDYAW LKDPNWQEVL RDPALLDPDI
RAYLEAENGY TDSVLGHTEA LQKTLVAEMR GRIKEDDSSV PQPDGPYAYL RKFREGGQHP
LYGRTPRDGG ELDIILDGDE LAKGTEYFQF GGRRHSLDHK LEAWSADAKG SEYYTIRVRD
WTTKQDLPDL VEETDGGVVW TADSSAFFYV KLDDNHRPMQ IWLHKLGTAQ ADDLLVYEEK
DAGWFTHIHE SSSGRFCVIA GGDHETSEQR LIDVSDPTAP PRLVAARELG VQYSLADRGD
ELFILTNADG AIDFKIVTAP LASPVRDNWR DLIPHREGIY IIDFDLFSGH MMRLERANAL
PSVTIRDLAS GDEHAIAFDE AAYSLSASGG WEFDTTVMRF SYSSMTTPSE VYDYDMATRE
RSLRKRQEIP SGQNPADYVT TRIMAKADDG AEVPVSLLHR KGLALDGAAP LLLYGYGSYG
HAMPAGFSAN ALSLVDRGFV YAIAHIRGGA DKGWGWYLDG KREKKTNSFD DFAACAQALI
DAKYTSAKRI VAHGGSAGGM LMGAVANRSG ELFAGIVAEV PFVDVLNTML DDTLPLTPPE
WPEWGNPISS EADFKTILSY SPYDNVAATT YPAILAMGGL TDPRVTYWEP AKWVARLRAT
MTGGGPVLLR INMGAGHGGA SGRFSRLDEV AIVYAFALWA VGLADSAA
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