| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3938 |
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| Symbol | |
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| ID | 3911745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4493600 |
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| End bp | 4495222 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885842 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_487542 |
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| Protein GI | 86751046 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.23105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGAAGA AGCCGAAGCC GAGCGCTGCC GTCAGCACCG TCAAATCCGC CACGCTCGAT
CTGCTCCGCG CGTTCAAGAT CGACAAGGTG TTCGGCAATC CCGGCTCCAC CGAGCTGCCG
TTCCTCAGCG ACTGGCCGGA CGACATCGAC TACGTACTGG CGCTGCAGGA GGCGAGCGCG
ATGGCGATGG CCGACGGCTA CGCGCAGGCG ACGCGCAACG CCGGCTTCGT CAATCTGCAT
TCAGCCGCCG GCGTCGGCAA CGCGCTCGGC AACATCTACA CCGCGTTCAA GAACCAGACG
CCGCTGCTGA TCACCGCCGG CCAGCAGGCG CGCAGCCTGC TGCCGTTACA GGCGTTTCTC
GGCGCCGAAC GCGCATCCGA ATTTCCGCGG CCTTACGTGA AATACAGCAT CGAGCCGGCG
CGCGCCGAGG ACGTGCCGGC GGCGATCGCC CGCGCCTATT ATGTGGCGAT GCAGCCGCCG
TGCGGGCCGA CCTTCGTGTC GGTGCCGATC GACGACTGGG CGCGGCCCGC GCAGCCGGTT
CCGCTGCGCA ACGTGACGCG CGAACTCGGC CCGGAGCGCG CGGCGATGCA GGCGCTGGCG
GAGGCGCTGG CGGAGGCGAA GAAGCCCGCC CTGGTGGTCG GCCCCGCGAT CGATCGCGCC
GCCGCGGTCG ATTTGATGGT GCGCCTCGCC GAGCGCGCCA ACGCGCCGGT GTTCGTCAGT
CCGTTCTCGG CGCGCTGCAG TTTCCCGGAG CGGCATCCGC TGTTCGCCGG CTTCCTGCCC
GCCTCGCCGG GGCAACTCTC CGAAGCCATC GGCGCCTACG ACGTCGTGGT GGTGATCGGC
GCACCGGTGT TCACCTTCCA TGTCGAAGGC CGCGCGTCGA TCTTCGACGG CGCAACGTCG
CTGTTCCAGA TCACCGACGA CGCCGAGGCC GCGTCGGTGA CGCCGCTCGG CACCAGCATC
ATCGCCACCA TGAAGCCGGC ATTATCGCTG CTGCTGGAGT TGTTACCAGA GACCCAATGC
GCGGCGCCGC CGGCACGGGC GCTGCCGCCA GCGCCTGCCG CGGCCGATCC GATGCCGGCC
GAATTTCTGC TCGATGCGTT GAGCAAGGCG ATGCCGGCCG GCACGATGCT GGTCGAGGAA
GCGCCGTCGC ATCGGCTGGC GATGCAGAAA TTCATGCCGA TGCGCGGCCA GGACAGTTTC
GCCACGATGG CGAGCGGCGG CCTCGGCTGG TCGCTGCCGG CCGCGGTCGG CTTCGCGCTG
GCGCATCCGG AGCGCCGCAC CGTGTGCCTG ATCGGCGACG GCTCGGCGAT GTATTCGATC
CAGGCGCTGT GGACTGCGGC AGAGCGCAAG CTGCCGCTGA CCGTGGTGGT GCTGAACAAT
GGCGGCTACG GCGCGATGCG CTCGTTCAGC CAGGTGATGC AGGTCCGCGA CGTGCCCGGG
CTGGAGCTGC CCGGGATCGA CTACGTCCAG CTCGCGCAGT CGATGGGCTG TGTCGCCGAA
CGCGTGTCAC GCTGTGAGGA CCTCGCGCCG GTGCTCGCCC GCGCGCTGGC GCATGACGGC
GTGTTCGTGG TCGAGGCGAC GCTGGATAGC GCGGTGCCGC TGCTGTACGC GAAGAACGGG
TAG
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| Protein sequence | MPKKPKPSAA VSTVKSATLD LLRAFKIDKV FGNPGSTELP FLSDWPDDID YVLALQEASA
MAMADGYAQA TRNAGFVNLH SAAGVGNALG NIYTAFKNQT PLLITAGQQA RSLLPLQAFL
GAERASEFPR PYVKYSIEPA RAEDVPAAIA RAYYVAMQPP CGPTFVSVPI DDWARPAQPV
PLRNVTRELG PERAAMQALA EALAEAKKPA LVVGPAIDRA AAVDLMVRLA ERANAPVFVS
PFSARCSFPE RHPLFAGFLP ASPGQLSEAI GAYDVVVVIG APVFTFHVEG RASIFDGATS
LFQITDDAEA ASVTPLGTSI IATMKPALSL LLELLPETQC AAPPARALPP APAAADPMPA
EFLLDALSKA MPAGTMLVEE APSHRLAMQK FMPMRGQDSF ATMASGGLGW SLPAAVGFAL
AHPERRTVCL IGDGSAMYSI QALWTAAERK LPLTVVVLNN GGYGAMRSFS QVMQVRDVPG
LELPGIDYVQ LAQSMGCVAE RVSRCEDLAP VLARALAHDG VFVVEATLDS AVPLLYAKNG
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