| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3839 |
|---|
| Symbol | |
|---|
| ID | 3911642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4384806 |
|---|
| End bp | 4386140 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885739 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_487443 |
|---|
| Protein GI | 86750947 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.24097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGCAGC CCCCCGACAG CCAGACCCCG CCGCCGCGAC AACCCTGGCT GTGGATGGAC
GTATCGACCA GCGCTCGCGC GCGCTCCGGC CAGATGAACG GCACGCTGCG GGTCGAGCAC
AGAATCGCCA CCGCGTTGCG CGAACGGATC GGACCGCAGC TCGGATTTTG CCGCTACGAA
CCGCTGCGAC AGGACTACGT GCCGGTTGCG GCGGTGCCCG ATCTCGGCGC CAAGCCGGTC
GCCGCGGCGA AGCCGAAGGC GGCGCGTGCC ACGATGCTGT CGTCGATCAA GCCGCTCGGC
AAGAAACTCG AACGCGCGGT TCGTACTTCG GTGCGTGGCG CTGTCGCGCC GCTGCTGCAG
AAAATGGCCG GCGGCGAGGG GCTGCCGCCG CCCGGCCCGG CTGCGGGCCA CGAGGTGCTG
CTGCTCGCCG GCGAGAACTG GTCGCGGGTC GACTACGCAG CGGTGGCGCG GATGCGCCGC
GCGCGCGGAA CCCGGATCGC GGCGGTGTGC CAGGACTTCA TCCCGGTGGT CGCGCCGCAA
TTCTTCGCCG ACGGCGAGTT CGTCACGCAG TTCGAGGCCT ATGCGCAGTT CCTGATCCGC
GAATGCGACA TGGTGATTTC GATTTCCGAC TCCACCAGCG CCGACGTGCG CGCCTATGCG
CAGCGCCATG GCGGGTTGCG CGGCGCGATC GAGGTGGTGC ATCTGGGCGC CGATCTGGCG
ACGCCGGCGA CCGCGCGCCG GCCCGCTGCG CTCGGCGACG GGCAGGCGCA GCGCTTCGTG
CTCAGCGTCT CGACCATCCA GTCGCGCAAG AATTTCGATC TGCTGTATCA CTTGTGGCGG
CGCTTGACCG AGCAGGGCAC GCCTCGTCTG CCGACGCTGG TGATCGTCGG GCAGCCCGGC
TTCGGCAGTG CCGACCTGCT GTGGCAGATC GCGCATGATC CGGTCACCGC GTCGTCGATC
CTGCATCTGC CTCGCGCTGG CGACGAGGAA CTGGCGTGGC TGTACCGGAA CTGCGCGTTT
ACGCTGTATC CCTCGTTCTA CGAGGGCTGG GGACTGCCGG TGTCGGAGAG CCTCGCCTTC
GGCAAGTACT GTCTCGCATC GAACACGTCG TCACTGCCGG AAGCCGGCGC CGGCCTCGCG
GGGCACCTCG ATCCGCTGGA TTTCGCAGCC TGGCGCGATG CGGTGCTTGA CCTGATCCAT
TCCCCTGAGC AACTTGCCGG ATACGAAGCC GCGATCCGGT CGAACTATCG CCCGGTAACC
TGGGCGCAAT CCGCCGGCCG GATGGTGGAG GTGCTGCGCA GCGTAGCGGC TGCCCCTGCC
GGTTTCACGA GCTAG
|
|---|
| Protein sequence | MAQPPDSQTP PPRQPWLWMD VSTSARARSG QMNGTLRVEH RIATALRERI GPQLGFCRYE
PLRQDYVPVA AVPDLGAKPV AAAKPKAARA TMLSSIKPLG KKLERAVRTS VRGAVAPLLQ
KMAGGEGLPP PGPAAGHEVL LLAGENWSRV DYAAVARMRR ARGTRIAAVC QDFIPVVAPQ
FFADGEFVTQ FEAYAQFLIR ECDMVISISD STSADVRAYA QRHGGLRGAI EVVHLGADLA
TPATARRPAA LGDGQAQRFV LSVSTIQSRK NFDLLYHLWR RLTEQGTPRL PTLVIVGQPG
FGSADLLWQI AHDPVTASSI LHLPRAGDEE LAWLYRNCAF TLYPSFYEGW GLPVSESLAF
GKYCLASNTS SLPEAGAGLA GHLDPLDFAA WRDAVLDLIH SPEQLAGYEA AIRSNYRPVT
WAQSAGRMVE VLRSVAAAPA GFTS
|
|---|
| |