| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3816 |
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| Symbol | |
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| ID | 3911619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4356673 |
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| End bp | 4358544 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885717 |
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| Product | flagellar hook-associated protein |
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| Protein accession | YP_487421 |
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| Protein GI | 86750925 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.308813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCG GAGACGCACT TTCGATCGCA ATGGCGGGCC TGCGCGCCAA CCAGGCCTCG
ATGTCGCTGG TGTCGTCGAA CGTCGCCAAC GCCGAGACGC CGGGTTACGT CCGCAAGACC
GTCAATCAGG TCACGACGCT GTCCGGCCCG TCGGGCAGCG GCGTTTCGAT CACCGGTGTC
AACCGCGAAC TCGACGCCTA TCTGCAGGCG CAGCTCCGCA CCGAGACGTC GGGCGCGTCC
TACGCCTCGT TGCGCTCCGA CTTCCTGCAG CAATTGCAGG GACTGTTCGG CGATCCGAAC
TCGAACGGCA CGCTGGAGGA CGCGTTCAAC GGTCTCACCG CGGCGACGCA GGCGCTCGCC
ACCAGCCCCG ACAGCACCTC GGCGCGGATC GGCGTGCTCA ACGCCGCGCA GGTGGTGTCC
GGCGTGCTGA ATTCGATGTC GAACGGCATC CAGACGCTGC GCACCGGCGC CGAGACCGGC
CTGACCGACG CCGTCAACAC GGCGAACAAT CTGCTGCAGC AGATCGCCTC GATCAACAAC
AACATCCGCA CCAACCCGGC CGGCGGCACC TCCACCGACG CGGCGACCGC GTCGCTGCTC
GACCAGCGCG ACGCCGCGAT CAACCAGCTC GCGCAGCTGA TGGACATCCG CGTCGTCACC
GACGCCTCCA ACCAGGTCAC GGTGTTCACC GGTTCGGGCA TGCAACTCGT CGGCATGCAG
GCCGCCCAGC TCAGCTTCGA CGCCCAGGGC ACCGTGACGC CGAGCACCAC CTGGAATCCC
AACACCTCGG CGAGCGAGCT CGGCTCGGTC CGGATCGTCT ACCCTGACGG CAGCACGGCC
GACCTGACCA ATTCGCTGAA GTCCGGCAAG ATGGCGGCCT ATGTCGAGCT GCGCGACAAC
ACGCTGGTGC AGGCGCAAAC CCAGCTCGAC CAGTTCGCCG CGGCGATGGC CAGCGCGCTG
TCGGACAAGA CCACCGCCGG CACGCCGGCG ACCTCCGGCG CGCAGACGGG TTTCGACCTC
GATCTGACCG ACATGAAGGC CGGCAACACG GTCAACATCA CTTACACGGA CACCACGACC
GGCGCGCAGC GGACCGTCTC GGTGATGCGC GTCGACGATC CGACGGCGCT GCCGCTGCCG
CAGACCGCGA CGCTCAATCC CAACGACTAC GTGGTCGGTA TCGATTTCTC CGGCGCCTCG
GGGTCGGTCA CCGCGCAGCT CAACGCCGCG CTGAACGCGA GAAACCTGCA GTTCACCGGG
ACCTCGCCGA ACATCACCGT CCTGAACAAT CCCGGCTTCT CGACGGTGAA TTCCGCCTCG
GTGACGTCGA CGGTGACGTC GCTGACCGGC GGCAGCGCCG AGGTGCCGCT GTTCACCGAC
GCCGGCTCGC CCTACACCGG CGCGATCAGC GGCAACGGCA CGCAGATGAC CGGCCTCGCG
CAGCGCATCT CGGTCAATCC CGCGCTGGTC ACCGATCCGT CGCGGCTGGT GGTGTATTCG
ACCACGCCGC CGACCGCGGC CGGCGACACC ACGCGGCCGG ATTTCATCAC CAAGCAGCTC
ACCAGCAGCA AATATCTGTA CTCGGCGACG ACCGGCATCG GATCGAATGC CGCGCCCTAC
AACGGCACGC TGGAGAGCTT CCTGCAGCAA TTCGTCAGCC AGCAGGGCTC GAATGCGCAG
GCGGCGACAC AGCTCGCCAG CGGACAAAGC GTCGTCCTGA ATACGCTGCA GCAGAAATAC
GCGACCAATT CCGGCGTCAA CATGGACGAG GAAATGGCGC ATCTGCTTTC GCTGCAGAAC
GCCTATTCGG CGAACGCGCG AGTGATGTCG ACGGTCAACC AGATGTATCA GACGCTGATG
CAGGCGATGT GA
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| Protein sequence | MSLGDALSIA MAGLRANQAS MSLVSSNVAN AETPGYVRKT VNQVTTLSGP SGSGVSITGV
NRELDAYLQA QLRTETSGAS YASLRSDFLQ QLQGLFGDPN SNGTLEDAFN GLTAATQALA
TSPDSTSARI GVLNAAQVVS GVLNSMSNGI QTLRTGAETG LTDAVNTANN LLQQIASINN
NIRTNPAGGT STDAATASLL DQRDAAINQL AQLMDIRVVT DASNQVTVFT GSGMQLVGMQ
AAQLSFDAQG TVTPSTTWNP NTSASELGSV RIVYPDGSTA DLTNSLKSGK MAAYVELRDN
TLVQAQTQLD QFAAAMASAL SDKTTAGTPA TSGAQTGFDL DLTDMKAGNT VNITYTDTTT
GAQRTVSVMR VDDPTALPLP QTATLNPNDY VVGIDFSGAS GSVTAQLNAA LNARNLQFTG
TSPNITVLNN PGFSTVNSAS VTSTVTSLTG GSAEVPLFTD AGSPYTGAIS GNGTQMTGLA
QRISVNPALV TDPSRLVVYS TTPPTAAGDT TRPDFITKQL TSSKYLYSAT TGIGSNAAPY
NGTLESFLQQ FVSQQGSNAQ AATQLASGQS VVLNTLQQKY ATNSGVNMDE EMAHLLSLQN
AYSANARVMS TVNQMYQTLM QAM
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