| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3768 |
|---|
| Symbol | |
|---|
| ID | 3911571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4302282 |
|---|
| End bp | 4303298 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885669 |
|---|
| Product | import inner membrane translocase, subunit Tim44 |
|---|
| Protein accession | YP_487373 |
|---|
| Protein GI | 86750877 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCT TGCATCGCAC GCGTGGCGTT GTTGCTGCAC TGGCCGTGAC CCTGTCGCTG
GCCATGCCGC TGGCGCTTGC GCTCTCGTCG GCAGCCGAAG CGCGCGTGGG CGGCGGCGGC
AGCTCGGGCT CGCGCGGCTC GCGCAGCTTC ATGGCGCCGA AAGCCACGCC GACGGCGCCG
AATGCCGCGC AGCCGCTGAA TCGCACCATG AGCCAGCCGG GCAGCCCCGG CATGGCCGCG
CCCGCGGCCG GCGCTGCCGC CAAGGGCGGC TTCTTCAACC GGCCCGGCAT GGGCATGCTC
GGCGGCCTCG CCGCCGGCTT CCTCGGCGCC GGCCTGCTCG GCATGCTGTT CGGCGGCGGC
TTCCTGTCCG GCCTCGGCGG CTTCGCGTCG ATCCTGGGCC TGATCCTGCA GGTCGTCTTG
GTGGTGGTGG TCGCGCGGCT GGCGTGGTCG TGGTGGCAGC GCCGCAACAA CCCGCAGCCC
GCGCCGGCCT ATGCCAATAC CAATGCCAAC AATAACGCCG GCCCGACCGT CGGCCCGGGT
CCCGAGCCCG CGCCGGCCTA TCGCACCGGC TTCGGTTTCG GCAGCGGTGG CGGCAGCGCC
TCGAACCTGC CGCCGCTCGA GATCAAGCCG GAGGACTACG AGGCGTTCGA GCAATTGCTC
GGCGACATCC AGTCCGCCTG GACGAACGAG GACACGGAGA AGCTGAATCA GCTCACGACC
CCCGAGATGG CGTCGTATTT CGCCAAGGAT CTGGCGGAGA ACAAGGCTGC CAACGACATC
AACAAGGTGT CGGACGTCAA GCTTCTGCAG GGCGACCTCG CCGAAGCGTG GCGCGAAGGC
GAGACCGACT ATGCCACCGT GGCGATGCGG TTCTCGCTGG TCGACAAGAC GCTGGAGCGC
GGCACCGACC GGCTGGTCGC CGGCAGCGAG ACCCCGATCG AGGTCACCGA AGTGTGGACC
TTCGCGCGGC GGCCCGGCGC CCACTGGGAA CTGTCGGCGA TCCAGCAGAC CAACTGA
|
|---|
| Protein sequence | MNFLHRTRGV VAALAVTLSL AMPLALALSS AAEARVGGGG SSGSRGSRSF MAPKATPTAP
NAAQPLNRTM SQPGSPGMAA PAAGAAAKGG FFNRPGMGML GGLAAGFLGA GLLGMLFGGG
FLSGLGGFAS ILGLILQVVL VVVVARLAWS WWQRRNNPQP APAYANTNAN NNAGPTVGPG
PEPAPAYRTG FGFGSGGGSA SNLPPLEIKP EDYEAFEQLL GDIQSAWTNE DTEKLNQLTT
PEMASYFAKD LAENKAANDI NKVSDVKLLQ GDLAEAWREG ETDYATVAMR FSLVDKTLER
GTDRLVAGSE TPIEVTEVWT FARRPGAHWE LSAIQQTN
|
|---|
| |