Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3619 |
Symbol | |
ID | 3911421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4154086 |
End bp | 4155003 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637885521 |
Product | inner-membrane translocator |
Protein accession | YP_487225 |
Protein GI | 86750729 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.551009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGA CGTGTTCTTT CTGTTCGGGA GCGTTGCCTT TGACCACCGC CACGATCATC CAGTCCCTGG CCAGCGGTCT GCTGATGGGA CTTCTCTACG GCCTGGTCGC GGTCGGTCTC GCGCTGATCT TCGGCCTGAT GGACGTCACC AATTTCGCCC ACGGCGAATT CCTGATGCTG GCGATGTACA TCACCTTCTT CCTGTTCACC TTCTTCGCGA TCGACCCGTT GCTCTCCGCG CCGTTGGTCG GCGGCGCGAT GTTCCTGTTC GGAGCCGTGG CCTATCTGTT CGTCATCCGC TTCGCGATGC GGGCGAAAGC CAATATTGGC ATGGTGCAGA TCTTCACCAC CTTCGGCCTC GCGATCCTGA TGCGGGGCCT CGCGCAATAT TTCTTCACGC CGGATTATCG CAGTATCAAC GTCTCCTGGC TCGGCGGCAA GACGATCTCG TTCGGCGGGA TCTTCCTGCC GGTGCCGCAA CTGGTCGGCG CGCTGGTGTC GCTTGCGGCG TTCGGCGCGC TGTACTTCTT CATGAAGAAG ACCGATTTCG GCCGCGCGCT GGAGGCGACG CGCGAGGACG CCGGCGCCGT GGCGCTGGTC GGCATCGACA AGAACAAGGT GTTCGCGCTC GGTTGGGGGC TCGGTTCGGC CCTGATCGGA TTGGCCGGCG CGGTGATGGC GATGTTCTTC TACATCTATC CGGACGTCGG CGCCTCGTTC GCGCTGATCG CCTATGTCAC CGTGGCGCTC GGCGGCTTCG GCAGCGTGTT TGGTGCCTTC GCCGGCGGCA TCATCGTCGG CCTCGTCGAG GCCACCACCG CGCTGCTGTT GCCGCCATCG CTGAAGGCGG TCGGCATCTA CGCGGTGTAC CTGCTCGTTG TCTTCATTCG GCCCCGTGGC CTGTTCGGAT CGATCTGA
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Protein sequence | MTETCSFCSG ALPLTTATII QSLASGLLMG LLYGLVAVGL ALIFGLMDVT NFAHGEFLML AMYITFFLFT FFAIDPLLSA PLVGGAMFLF GAVAYLFVIR FAMRAKANIG MVQIFTTFGL AILMRGLAQY FFTPDYRSIN VSWLGGKTIS FGGIFLPVPQ LVGALVSLAA FGALYFFMKK TDFGRALEAT REDAGAVALV GIDKNKVFAL GWGLGSALIG LAGAVMAMFF YIYPDVGASF ALIAYVTVAL GGFGSVFGAF AGGIIVGLVE ATTALLLPPS LKAVGIYAVY LLVVFIRPRG LFGSI
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