Gene RPB_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3526 
Symbol 
ID3911328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4034198 
End bp4034920 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID637885428 
Producthypothetical protein 
Protein accessionYP_487132 
Protein GI86750636 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.792067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.769555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC TTTCGATCGC CCTCGTTGCG CTGCTCGGCG CGATGAATTC CGCGCAGGCG 
CATCAGATCT GGATCGAGCA GGCCGACGGG CAGAACGCGG TGGTGCGGTT CGGCGAGTTC
GGCGACAATC TGCGCGAAGT CTCGCCGGGC CTGCTCGACA AGTTCAGCAA GCCGACCGCG
ACGCTGATCT CCGCCAAGGG CGAGCAGACC GTCGACGCCA CCAAGACCGC GACCGGCTTC
ACGCTGCCGT TCGCCGCCAA GGCCGGCGAC AGCATCGTCG CGCAGGATGC CAACTACCCG
CTCTACACCT GGAAGCAGCC CGACAAGGAG GTCCGCAACT GGTTTCATCC GGCCGCGCGC
CTGATCACCG GCTTCGCCGC GCTGCCGCCC AAGCTGCCGC TCGACCTCGT GCCCACCGGC
AAGACCGGCG AATTCAAGCT GGTGTTCAAG GATCAGCCGA AGCCGAAGAC CAAGGTGACG
CTGACGACGC AATCCGGCTG GGCCAAGGAA GCGCACACCG ACGCGCAGGG GCAGGTGAGT
TTCGAGATGC CGTGGAAGGG CGTCTACGTC GTCGAGGTCA GCTACACGGA TCGCACGCCG
GGCGAACGCG CCGGCGAGAA GTTCGACGCC GTGGTCTATG GCACCACGCT GACCTTCATG
CAGGCCGACG GCCTGCCGCC GATCCCCGCG GGCCCGGCGG CGACGCCGAC CGCGCCGAAA
TGA
 
Protein sequence
MNKLSIALVA LLGAMNSAQA HQIWIEQADG QNAVVRFGEF GDNLREVSPG LLDKFSKPTA 
TLISAKGEQT VDATKTATGF TLPFAAKAGD SIVAQDANYP LYTWKQPDKE VRNWFHPAAR
LITGFAALPP KLPLDLVPTG KTGEFKLVFK DQPKPKTKVT LTTQSGWAKE AHTDAQGQVS
FEMPWKGVYV VEVSYTDRTP GERAGEKFDA VVYGTTLTFM QADGLPPIPA GPAATPTAPK