Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3526 |
Symbol | |
ID | 3911328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4034198 |
End bp | 4034920 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885428 |
Product | hypothetical protein |
Protein accession | YP_487132 |
Protein GI | 86750636 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.792067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.769555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC TTTCGATCGC CCTCGTTGCG CTGCTCGGCG CGATGAATTC CGCGCAGGCG CATCAGATCT GGATCGAGCA GGCCGACGGG CAGAACGCGG TGGTGCGGTT CGGCGAGTTC GGCGACAATC TGCGCGAAGT CTCGCCGGGC CTGCTCGACA AGTTCAGCAA GCCGACCGCG ACGCTGATCT CCGCCAAGGG CGAGCAGACC GTCGACGCCA CCAAGACCGC GACCGGCTTC ACGCTGCCGT TCGCCGCCAA GGCCGGCGAC AGCATCGTCG CGCAGGATGC CAACTACCCG CTCTACACCT GGAAGCAGCC CGACAAGGAG GTCCGCAACT GGTTTCATCC GGCCGCGCGC CTGATCACCG GCTTCGCCGC GCTGCCGCCC AAGCTGCCGC TCGACCTCGT GCCCACCGGC AAGACCGGCG AATTCAAGCT GGTGTTCAAG GATCAGCCGA AGCCGAAGAC CAAGGTGACG CTGACGACGC AATCCGGCTG GGCCAAGGAA GCGCACACCG ACGCGCAGGG GCAGGTGAGT TTCGAGATGC CGTGGAAGGG CGTCTACGTC GTCGAGGTCA GCTACACGGA TCGCACGCCG GGCGAACGCG CCGGCGAGAA GTTCGACGCC GTGGTCTATG GCACCACGCT GACCTTCATG CAGGCCGACG GCCTGCCGCC GATCCCCGCG GGCCCGGCGG CGACGCCGAC CGCGCCGAAA TGA
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Protein sequence | MNKLSIALVA LLGAMNSAQA HQIWIEQADG QNAVVRFGEF GDNLREVSPG LLDKFSKPTA TLISAKGEQT VDATKTATGF TLPFAAKAGD SIVAQDANYP LYTWKQPDKE VRNWFHPAAR LITGFAALPP KLPLDLVPTG KTGEFKLVFK DQPKPKTKVT LTTQSGWAKE AHTDAQGQVS FEMPWKGVYV VEVSYTDRTP GERAGEKFDA VVYGTTLTFM QADGLPPIPA GPAATPTAPK
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