Gene RPB_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3507 
Symbol 
ID3911309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand+ 
Start bp4015924 
End bp4016502 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content72% 
IMG OID637885409 
Producthypothetical protein 
Protein accessionYP_487113 
Protein GI86750617 
COG category[S] Function unknown 
COG ID[COG5402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.315458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGA TCTTCTTCAC TTTGCTGGCG CTGATCATCG CCGCGGGCGT CGGCGTCGGC 
GCGACCTGGA TGACGGCGAC GCGCGGCACC GATTTCGGCA CGCTGACGAT CGGCGCCTGG 
ACCGCCCGGC CGCGCGCCGG CACCGCCGAA ATCGACCCCT ACGCCCGCGC TTCGATCGCG 
CGCAGCGGCG AACTGCCGAT CGGCGCCGGC GACGGCATCG CCTTCATCGC CACCGCCGAC 
GACGCCAAGC GGCCGCTCGA CGGCCGCTGC GACATCGAGG TCAGCGGCGT CACCCCGCCG 
GCGCGGTTCT GGACGCTGAC GCTGTACGAT CCGCGCGGCA CTCTGGTCGC CAACAATCTC 
GAGCGCTACG GCTTCACCAG CCAGGAAATC CTGCGCACCG CCGACGGCGC GTTCAGGATC 
CGCGTCGCGG CGCGGTCGCG CGCCGGCAAT TGGCTGCCGA CCGGCGGCGT CGAACGCTAT 
ATGCTGGTGC TGCGGCTGTA CGACACGCCG GTCGGCGTCG CCACCCGCAC CCAGCGCGAC 
GCGCCGATGC CGTCGATCGC CACCATGGGC TGCCCATGA
 
Protein sequence
MRLIFFTLLA LIIAAGVGVG ATWMTATRGT DFGTLTIGAW TARPRAGTAE IDPYARASIA 
RSGELPIGAG DGIAFIATAD DAKRPLDGRC DIEVSGVTPP ARFWTLTLYD PRGTLVANNL 
ERYGFTSQEI LRTADGAFRI RVAARSRAGN WLPTGGVERY MLVLRLYDTP VGVATRTQRD 
APMPSIATMG CP