| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3450 |
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| Symbol | |
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| ID | 3911252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3956019 |
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| End bp | 3957122 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885353 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_487057 |
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| Protein GI | 86750561 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0733507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT GGTTTGTGTT GGCGATCATG ACGGCCGTCG CGGTGTTCGC CGTGCTGTGG
CCGCTCGGTC GCGGCGTCCG CGCCGAGCGC GAGGGCAGCG AAGCCAATGT CTACAAGGAC
CAGCTTGCGG AGATCGACCG CGACGCCGCC ATCGGTCTGA TCGGCCCTGC CGAAGCCTCC
GCCGCCCGCG TCGAAATCGG CCGGCGATTG CTGGCCAGCG CCGATCCCGA AACCGTGGCG
CCGGTGACGA CGCGCCGCGG GCCGCGGCGA GGGGTCGCGG TGTTCGCGCT GGTCGGACTG
CCGGCGTTGG CGCTCGCGAT CTATCTGCCG CTCGGCTCGC CGATGCAGGG CGACGATCCG
CTGGCGAGCC GGACCAAGAC CGCCGCCGCG TCGCAGCCGC TCGAAAATCT GGTGGCGCAG
GTCGAGGCGC ATCTCGAGAA GAATCCGACC GACGGCCGCG GCTGGACCGT GCTGGCGCCG
GTGCTGGCCA AGCTCGGTCG GTTCGACGAC GCCGCGCGCG CCTATCGAAA TTCGCTGACC
TATGCCGGCG AAACCGCGGA CCGCCACGCC GATCTCGGCG AGGTGCTGTC GATGGCGGCG
GGCGGGGTGG TCACCGCCGA CGCCAAGTCG GCATTCGAGC GCGCGGTCAA GCTGAACGCC
GACGAGGTCA AGGCGAGGTA TTTCCTCGGC CTCGCCGCCG AGCAGGACGG CCGGCCGAAG
GACGCCGCGG CGATGTGGCG CGCGATGCTG GAAAAGGCTC CCGCCGATGC GCCGTGGAAG
CCGATGCTGC AGGCGCAGAT CGCCCGGATC GAGGGTGCGC CGCTGCCGGC GCTGCCCGAC
GAGACGATCG CTTCGGCGCA AAACATGAGC GAGGCCGACC GCAGCGCGAT GATCCGCGGC
ATGGTCGACA AGCTCGCAGC CCGGCTGCAG CAGAACGGCG ACGACGTCGA GGGATGGCTG
CGGCTGGTGC GTGCCTATAT GGTGCTGGGC GACGGCGACA AGGTGAAGCA GGCGCAGGCG
CAGGCACGGC AGGCGGTGGC GGGCAATGCC GAGCGGCTCA AGCAGCTCAA TGACGGGCTG
AAGACTCTGG GGCTCGACGG ATGA
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| Protein sequence | MALWFVLAIM TAVAVFAVLW PLGRGVRAER EGSEANVYKD QLAEIDRDAA IGLIGPAEAS
AARVEIGRRL LASADPETVA PVTTRRGPRR GVAVFALVGL PALALAIYLP LGSPMQGDDP
LASRTKTAAA SQPLENLVAQ VEAHLEKNPT DGRGWTVLAP VLAKLGRFDD AARAYRNSLT
YAGETADRHA DLGEVLSMAA GGVVTADAKS AFERAVKLNA DEVKARYFLG LAAEQDGRPK
DAAAMWRAML EKAPADAPWK PMLQAQIARI EGAPLPALPD ETIASAQNMS EADRSAMIRG
MVDKLAARLQ QNGDDVEGWL RLVRAYMVLG DGDKVKQAQA QARQAVAGNA ERLKQLNDGL
KTLGLDG
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