Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3416 |
Symbol | |
ID | 3911218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3903636 |
End bp | 3905762 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885319 |
Product | molybdopterin oxidoreductase |
Protein accession | YP_487023 |
Protein GI | 86750527 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.928899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.530079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGA CCACAGTTGT AGGCGCGTGT CCACACGACT GCCCTGATAC TTGCTCCATC ATCACGACCG TCGAGGACGG CAAGGCGATC GCCGTCCGCG GCAATCCGGA TCACCCGTTC ACGCGCGGAC GGTTGTGCGT CAAGGTCAAC AACTACGAGG AGCGCGTCTA CAGCGACAAG CGCGTCCTCT ACCCGATGAA ACGCGTCGGC CCCAAGGGCA CCAAGCAGTT TCAGCGAATT TCCTGGGACG AGGCGATCGC GACGATCGCG ACCCGCTGGA AAGCGATCAT CGCCGAGCAC GGTGCGCAGG CGATCCTGCC CTACAGCTAT CTCGGCACCC AGGGCGTCAT CAACGGGCTC AATGTCGGCG ATCCGCTGTT CAACAAGCTC GGCGCCACTG TGCTCGAACG CACCTTCTGC GACTCTGGTT CCTGTACGGC CTATCTGCTG ACGATCGGGC ACACGCCGGG TGTCGATCCC GAGAGCTTCG TGCACTCGAA GTACATCATT CTATGGGCCT GCAATACGCT CAGCACCAAT TCGCATCACT GGCCGTTCAT CGAGCAGGCC AAGAAGAACG GCGCCAAGCT GGTGGTGATT GATCCGGTCA AGACACGGAC CGCGCGGCTG GCGGACTGGC ACATCCAGAT CCGGCCTGGC ACCGATGCGG CGCTGGCGCT GGCGATGATG CACGTGATCA TCAAGGAGAA CCTGGTCGAT CGCGATTACA TCGACAAGCA CACCGTCGGG TTCGACGAAC TGGCGGAGCG CGCCGCCACC TATACGCCGG AATTCGCCTC GCAGGAGACC GGCATTCCGG TCGAGGATAT CGTCAAGCTG GCGCGCGACT ACGCCACGAC GCCGCCCGCG GTGGTGCGGA TCGGCGTCGC CGTGGAGCGC CATGCCGGCG GCGGCCAGAC CGTGCGCGCG ATCGCCTGCC TTCCCGGACT GATCGGTGCT TGGAAGCACG TCGGTGGCGG CCTGCTGCAG CTGCCGATCT GGGCTTTCCC GGTCAAATGG GACGTGCTGA TGCGCCCCGA TCTTCAGCCG GAGAACATGC GCGTGCTGAA TTCCTGGCGG CTCGGCGCGG CGCTGACCGG CGAACTCGGC TTCGATCCGC CGATCAAGGC GCTGTTCGTC TACAACGCCA ACCCGATGGC GATGGTGACC GAGCAGGACA AGATCGAGAA GGGGCTCGAA CGCGAAGATT TATTCACGGT CGTCAGTGAG CATTTCATCA CCGACACGGC GAAGTACGCC GACATCGTGC TGCCCGCGAC CACGCAGCTC GAGCAGAAGG ACATCATGTT CTCCTGGGGG CATCTGTATC TGTCCTACAA CAACCAGGCG ATCGAGCCGC TCGGCGAGGC TGTGCCGAAC ACCGAACTGT TCCGGCGCCT CGCCAAGGCG ATGGGGATCA CCGATCCGGC GTTCTTCCGC ACCGACGACG AGATGATCGA GGCGGCGCTG GACTGGAGCA GCCCGGTGCT GCAGGGGATC ACGCTCGACG AGGTCAAGGC CAAGGGCTAT TCGCGGCTCG CCATGCCGGC GTCCGACGAC TGGGCGCCGC ACCGCGACGG CAATTTCCCG ACTGCTACCG GCAAATGCGA GTTCAAATCG ACGATCGCCG CGGGCGGCAA TTTCGTCGCG CCGCTGTTCC GGCAGGGCTA CAACGGCGAC CAGGACGGCA CGCCGATCGA TCCGTTGCCG CACTACATCG CGCCGAACGA GAGTGTCCGG ACGGCGCCGG CGCTGGCGGC GCGCTATCCG CTCAGCCTGA TCTCGCCGAA AAGCCACGCT TTCCTCAATT CGAACTACGG CAACCTGCCG GCGCAGACCG CGCAGGCGGG CGAAGAGCAG GCGGTGATCC TGAATCCGGA CGACGCCGCG TTCCGCGGCA TCGAAGCCGG CGCGCCGATC CGCGTGTTCA ACGATCGCGG CTCGTTCGAA GCCTATGCGA CGGTGTCGTC CGATATCATG GCGGGGGTGG TGGTTGCGCC GTCCGGCTAC TGGCAGCGCT CCAATCGCAA AGGCGCGACC GTTCACGCGC TGACGCCGCC GGCCTTCGCC GATCTCGGCC GTGCGCCGAC GTTCTCGGAC ATTCTCGTCC AGGTCGGCCG ACTGTAG
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Protein sequence | MARTTVVGAC PHDCPDTCSI ITTVEDGKAI AVRGNPDHPF TRGRLCVKVN NYEERVYSDK RVLYPMKRVG PKGTKQFQRI SWDEAIATIA TRWKAIIAEH GAQAILPYSY LGTQGVINGL NVGDPLFNKL GATVLERTFC DSGSCTAYLL TIGHTPGVDP ESFVHSKYII LWACNTLSTN SHHWPFIEQA KKNGAKLVVI DPVKTRTARL ADWHIQIRPG TDAALALAMM HVIIKENLVD RDYIDKHTVG FDELAERAAT YTPEFASQET GIPVEDIVKL ARDYATTPPA VVRIGVAVER HAGGGQTVRA IACLPGLIGA WKHVGGGLLQ LPIWAFPVKW DVLMRPDLQP ENMRVLNSWR LGAALTGELG FDPPIKALFV YNANPMAMVT EQDKIEKGLE REDLFTVVSE HFITDTAKYA DIVLPATTQL EQKDIMFSWG HLYLSYNNQA IEPLGEAVPN TELFRRLAKA MGITDPAFFR TDDEMIEAAL DWSSPVLQGI TLDEVKAKGY SRLAMPASDD WAPHRDGNFP TATGKCEFKS TIAAGGNFVA PLFRQGYNGD QDGTPIDPLP HYIAPNESVR TAPALAARYP LSLISPKSHA FLNSNYGNLP AQTAQAGEEQ AVILNPDDAA FRGIEAGAPI RVFNDRGSFE AYATVSSDIM AGVVVAPSGY WQRSNRKGAT VHALTPPAFA DLGRAPTFSD ILVQVGRL
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