Gene RPB_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3403 
Symbol 
ID3911205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3889437 
End bp3890315 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID637885306 
ProductABC transporter related 
Protein accessionYP_487010 
Protein GI86750514 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAA CGGAATTCAA CGCGGCGCCC GCCAGCATCA GCGTGCAGAA CCTCACCGTC 
ACCTATCCGA ACGGCTTCAC CGCCGTGAAG GACGCGTCGT TCGCGCTCGA CGCCGGCACG
ATCTGCGCCC TGGTCGGCGT CAACGGCAGC GGCAAGTCGA CCATCTTCAA GGCGATCATG
GGCTTCGTGC GGCCCACCTC CGGCGTGGTG AAACTCTGCG GTCTGCCGGT CGCGGAGGCG
CTGAAGAACA ACATCGTCGC CTATGTGCCG CAGAGCGAGG ACGTCGACTG GAACTTCCCG
GTGCTGGTCG AAACCGTGGT GATGATGGGC CGCTACGGCC ACATGAACTT CCTGCGGATT
CCGTCGCGCC TCGATCGCCG CAAGGTCGAC GAGGCGCTGG AGCGCGTCGG CATGAGCGAC
TACCGGCACC GCCAGATCGG CGAATTGAGC GGCGGCCAGA AGAAGCGTGT GTTCCTGGCC
CGCTCGCTGG CGCAGGGCGG CCGCATCATC CTGCTCGACG AGCCGTTCAC CGGCGTCGAC
GTCAAGACCG AAGCCGCGAT CATCGGGCTG TTGCGCGAGT TGCGGGACTC CGGCCATCTG
ATGCTGGTCT CGACCCACGA CCTCGGCAGC ATTCCGGAAT TCTGCGACCA GGTCGTCCTG
ATCAACCGCT CCGTTCTCGC CGCCGGGCCG ACCGCCGAGA CCTTCACGCG CGACAATCTC
GAACGGACGT TCGGCGGCGT GCTGCGCAAC CGGCAATTCG GCGGCACCGG GCCGGATCGC
GACGACGACC GCGGGCAGTT CACGGTGATC AGCGACGACG AACGGCCGCT CGTGCTGCTC
GGCGAGCGCC GGAGCCAGCG CCAGGACGAG GAGACCTGA
 
Protein sequence
MARTEFNAAP ASISVQNLTV TYPNGFTAVK DASFALDAGT ICALVGVNGS GKSTIFKAIM 
GFVRPTSGVV KLCGLPVAEA LKNNIVAYVP QSEDVDWNFP VLVETVVMMG RYGHMNFLRI
PSRLDRRKVD EALERVGMSD YRHRQIGELS GGQKKRVFLA RSLAQGGRII LLDEPFTGVD
VKTEAAIIGL LRELRDSGHL MLVSTHDLGS IPEFCDQVVL INRSVLAAGP TAETFTRDNL
ERTFGGVLRN RQFGGTGPDR DDDRGQFTVI SDDERPLVLL GERRSQRQDE ET