Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3403 |
Symbol | |
ID | 3911205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3889437 |
End bp | 3890315 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885306 |
Product | ABC transporter related |
Protein accession | YP_487010 |
Protein GI | 86750514 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAA CGGAATTCAA CGCGGCGCCC GCCAGCATCA GCGTGCAGAA CCTCACCGTC ACCTATCCGA ACGGCTTCAC CGCCGTGAAG GACGCGTCGT TCGCGCTCGA CGCCGGCACG ATCTGCGCCC TGGTCGGCGT CAACGGCAGC GGCAAGTCGA CCATCTTCAA GGCGATCATG GGCTTCGTGC GGCCCACCTC CGGCGTGGTG AAACTCTGCG GTCTGCCGGT CGCGGAGGCG CTGAAGAACA ACATCGTCGC CTATGTGCCG CAGAGCGAGG ACGTCGACTG GAACTTCCCG GTGCTGGTCG AAACCGTGGT GATGATGGGC CGCTACGGCC ACATGAACTT CCTGCGGATT CCGTCGCGCC TCGATCGCCG CAAGGTCGAC GAGGCGCTGG AGCGCGTCGG CATGAGCGAC TACCGGCACC GCCAGATCGG CGAATTGAGC GGCGGCCAGA AGAAGCGTGT GTTCCTGGCC CGCTCGCTGG CGCAGGGCGG CCGCATCATC CTGCTCGACG AGCCGTTCAC CGGCGTCGAC GTCAAGACCG AAGCCGCGAT CATCGGGCTG TTGCGCGAGT TGCGGGACTC CGGCCATCTG ATGCTGGTCT CGACCCACGA CCTCGGCAGC ATTCCGGAAT TCTGCGACCA GGTCGTCCTG ATCAACCGCT CCGTTCTCGC CGCCGGGCCG ACCGCCGAGA CCTTCACGCG CGACAATCTC GAACGGACGT TCGGCGGCGT GCTGCGCAAC CGGCAATTCG GCGGCACCGG GCCGGATCGC GACGACGACC GCGGGCAGTT CACGGTGATC AGCGACGACG AACGGCCGCT CGTGCTGCTC GGCGAGCGCC GGAGCCAGCG CCAGGACGAG GAGACCTGA
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Protein sequence | MARTEFNAAP ASISVQNLTV TYPNGFTAVK DASFALDAGT ICALVGVNGS GKSTIFKAIM GFVRPTSGVV KLCGLPVAEA LKNNIVAYVP QSEDVDWNFP VLVETVVMMG RYGHMNFLRI PSRLDRRKVD EALERVGMSD YRHRQIGELS GGQKKRVFLA RSLAQGGRII LLDEPFTGVD VKTEAAIIGL LRELRDSGHL MLVSTHDLGS IPEFCDQVVL INRSVLAAGP TAETFTRDNL ERTFGGVLRN RQFGGTGPDR DDDRGQFTVI SDDERPLVLL GERRSQRQDE ET
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