Gene RPB_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3353 
Symbol 
ID3911155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3835464 
End bp3835745 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content61% 
IMG OID637885256 
Productacyl carrier protein 
Protein accessionYP_486960 
Protein GI86750464 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0790473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CATTCGATCG GGTGGCCACC ATCATCGCGG AAACCTGTGA CATCCCGCGC 
GATACGATCA CCCCGGAAAG CCACGCCATC GATGATCTGG GGATCGACAG CCTGGACTTC
CTCGACATCG CCTTTGCGAT CGACAAGGCG TTCGGTATCA AACTGCCGCT CGAGAAGTGG
ACCCAGGAGG TCAACGACGG CAAGGCGACC ACCGAGCAGT ATTTCGTCCT GAGCAACCTC
GCCGCCCGCA TCGACGAGTT GGTCGCCGCC AAGGGCGCGT AG
 
Protein sequence
MTSTFDRVAT IIAETCDIPR DTITPESHAI DDLGIDSLDF LDIAFAIDKA FGIKLPLEKW 
TQEVNDGKAT TEQYFVLSNL AARIDELVAA KGA