Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3349 |
Symbol | |
ID | 3911151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3832995 |
End bp | 3833600 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885252 |
Product | alkylhydroperoxidase |
Protein accession | YP_486956 |
Protein GI | 86750460 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.347693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0410777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGCC TTGCGGAACC TTCGATGACA TCAGCTGCCG TCTCTCGCTT TCCCGTTCCT GCGCTCGCCG ATATGCCCGA CGATATTCGC GCCCGAATCC TCGGCGTGCA GGAGAAGTCC GGCTTCGTGC CCAACGTGTT TCTGTCGCTG GCCGGCCGGC CGGACGAATT CCGGGCCTTC TTCGCCTATC ACGACGCGCT GATGGAGAAG GACAGCGGGC TGTCGAAGGC CGAACGCGAG ATGATCGTGG TCGCGACTTC GGCGGCCAAT CAGTGCCAGT ATTGCGTGAT CGCGCACGGC GCGATCCTGC GCATCCGCGC CAAAAATCCG CTGATCGCCG ACCAGATCGC CACGAACTAT CGCAAGGCCG ACATCACGCC GCGGCAGAAG GCGATGCTCG ACTTCGCGAT GAAGGTCAGC CGCGACGCCG AGCGGGTCGG CGACGCCGAT TTCGATGCGC TCGAGGGCCA CGGCTTCGGC GACGATGATA TCTGGGACAT CGCGGCGGTC GCGGCGTTCT TCGCGCTGTC CAACCGCATG GCCAATGTCA CCGGCATGCG GCCGAACGAC GAGTTCTATC TGATGGGCCG GCTGCCGAAA TCATGA
|
Protein sequence | MSRLAEPSMT SAAVSRFPVP ALADMPDDIR ARILGVQEKS GFVPNVFLSL AGRPDEFRAF FAYHDALMEK DSGLSKAERE MIVVATSAAN QCQYCVIAHG AILRIRAKNP LIADQIATNY RKADITPRQK AMLDFAMKVS RDAERVGDAD FDALEGHGFG DDDIWDIAAV AAFFALSNRM ANVTGMRPND EFYLMGRLPK S
|
| |