Gene RPB_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3341 
Symbol 
ID3911143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3822249 
End bp3823268 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID637885244 
Productketol-acid reductoisomerase 
Protein accessionYP_486948 
Protein GI86750452 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.764687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0745922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTT ACTACGATCG CGACGCCGAC CTGAATCTGA TCAAGGGCAA GAAGGTCGTC 
ATCGTCGGCT ACGGCAGCCA GGGCCACGCC CACGCGCTGA ACCTCAAGGA TTCCGGCGTC
AAGGACGTCG CGATCGCGCT GCGCAAGGGC TCGGCCACGG CCAAGAAGGC CGAAGCCGCC
GGCTTCAAGG TGATGGAAGT CGCCGAGGCC GCCAAATGGG CCGACGTGAT GATGATGCTG
ACGCCCGACG AATTGCAGGG CGAGATCTAT CGCGACCACC TGCACGACAA CATGAAGCAG
GGCGCGGCGC TGCTGTTTGC GCACGGCCTC AACGTCCACT TCAACCTGAT CGAGCCGCGC
GCCGATCTCG ACGTGCTGAT GGTCGCGCCG AAGGGCCCGG GCCACACCGT GCGTTCGGAA
TATCAGCGCG GCGGCGGCGT GCCGAGCCTG ATCGCGATCC ACCAGGATCC GTCGGGCAAT
GCTCACGACC TCGGCCTCAG CTACGCCTCG GCGATCGGCG GCGGCCGCGC CGGCATCATC
GAGACCTCGT TCAAGGAAGA ATGCGAGACC GATCTGTTCG GCGAGCAGGT GGTGCTGTGC
GGCGGTCTGG TCGAACTGAT CAAGGCCGGC TTCGAGACGC TGGTGGAAGC CGGCTACGCG
CCGGAGATGG CGTATTTCGA GTGCCTGCAC GAAGTGAAGC TGATCGTCGA CCTGATCTAT
GAAGGCGGCA TCGCCAACAT GAACTACTCG ATCTCCAACA CCGCGGAATA CGGCGAATAC
GTCACCGGCC CGCGCATCGT CACCGCCGAG ACCAAGGCGG AGATGAAGCG GGTGCTGGCC
GACATCCAGA ACGGCATCTT CACCCGCAAC TGGATGCTCG AGAACAAGGT CAACCAGACC
TCGTTCAAGG CCACCCGCGC CAAGCTCGCC GCCCACCCGA TCGAGGAAGT CGGCGCCAAG
CTCCGCGACA TGATGCCCTG GATCAAGAAG GGCGCGCTCG TGGACAAGAG CAAGAACTAA
 
Protein sequence
MRVYYDRDAD LNLIKGKKVV IVGYGSQGHA HALNLKDSGV KDVAIALRKG SATAKKAEAA 
GFKVMEVAEA AKWADVMMML TPDELQGEIY RDHLHDNMKQ GAALLFAHGL NVHFNLIEPR
ADLDVLMVAP KGPGHTVRSE YQRGGGVPSL IAIHQDPSGN AHDLGLSYAS AIGGGRAGII
ETSFKEECET DLFGEQVVLC GGLVELIKAG FETLVEAGYA PEMAYFECLH EVKLIVDLIY
EGGIANMNYS ISNTAEYGEY VTGPRIVTAE TKAEMKRVLA DIQNGIFTRN WMLENKVNQT
SFKATRAKLA AHPIEEVGAK LRDMMPWIKK GALVDKSKN