| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3338 |
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| Symbol | |
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| ID | 3911140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3818845 |
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| End bp | 3819696 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885241 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486945 |
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| Protein GI | 86750449 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.820059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.195487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTG TCGTCGTCAC CGGGGTGTCC AGCGGGATCG GTCACGCCAT CGCGAAACTG
CTGCTGGACA AGGGTTTTCG CGTATTCGGC AGCGTCCGCA AGCCGGCCGA TGCGGAGCGG
CTGATCCACG AATTCGGGGC GAACTTCACG CCACTGATTT TCGACGTCAC CGACGAGGCC
GCGATTCGGG CGGCGGCGGG CGAGGTCCGG GCGGCGCTCG GCGGTGAGCG GCTCGCCGGC
CTGGTCAACA ATGCCGGCAT CGCGGTGTCG GGGGCGGTGG TCGATCTGTC GGCCGACGAC
TTCCGACGGC AGTTCGAGGT CAATGTGATC GGCCCGATCG TGGCGACGCA GGCATTCGCG
CCGCTGCTGG GCACCGACGA TACGCTGCGC GGGCCGCCGG GGCGGATCGT GATGATGTCG
TCGATCGCAG GCCGGTTCGG CAATCCGCTG ATGGCGGCTT ACTCCGCGTC GAAACACGCG
CTCAACGGCC TGTCGGACGG GCTGCGCCGC GAGATGATGC TGTTCGGCAT CGACGTGGTG
ATCATCGCGC CCGGCGCGGT CAAGACGCCG ATCTGGGCCA AGGCCGAGCA CGAGGACGTA
TCGCGCTTCG CCAACTCACC GTTCTATCCG GCGCTGCAGA CGATCCGCGC GATGCTGCCG
AAGATGGACC AAAGCGGCCT GCCGCCGGAG ACGATCGCGC AGCATGTGTT CGATGCGCTG
ACATCGCCGT CGCCGAAGGC CCACGATGTG ATCACGCCGG GACCGCTGCA GTTCTGGCTG
TCGACCAAGC TGCCGCCGCG GTGGATCGAC AAGGTGGTGG CAAAGCGGCT CGGGCTGCGG
CCCGCGAAGT AA
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| Protein sequence | MKSVVVTGVS SGIGHAIAKL LLDKGFRVFG SVRKPADAER LIHEFGANFT PLIFDVTDEA
AIRAAAGEVR AALGGERLAG LVNNAGIAVS GAVVDLSADD FRRQFEVNVI GPIVATQAFA
PLLGTDDTLR GPPGRIVMMS SIAGRFGNPL MAAYSASKHA LNGLSDGLRR EMMLFGIDVV
IIAPGAVKTP IWAKAEHEDV SRFANSPFYP ALQTIRAMLP KMDQSGLPPE TIAQHVFDAL
TSPSPKAHDV ITPGPLQFWL STKLPPRWID KVVAKRLGLR PAK
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