Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3301 |
Symbol | |
ID | 3911102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3771567 |
End bp | 3772529 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637885203 |
Product | triphosphoribosyl-dephospho-CoA synthase |
Protein accession | YP_486908 |
Protein GI | 86750412 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.669404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTGTT CACCATTTCA CGCCGCGGAT ATCGCGCCCT ATTTCGCCGA CGGATTGGCT CCGAAGGCTT GGACGATAGG GTCGGCCTGT CTCAGCGGCA TTCTCCTCGA AGTAGCAACT CATCCGAAGC CGGGTCTGGT GACGCCGCGT TCGATGGGTG CGCACACCGA CATGGATCAG CAGACGTTCA TGCTGACGTC GGCTGCCATC GCGCCGTGCT TCCACCGCTG CGCGTCGATC GGCTTCAGCC ATCGCGGCGA TGCCGTCAGT GCGCTGCCGC TGGTACGCGC GGTCGGCCGC GAGTACGACG CACTGTTGAT GGCGGCGTCG AACGGCGTGA ACACCCAACG CGGCGCACTG TTCGCGCTCG GTGTCACCGC CGCCGCCGCA GGACGCGCCG CGCGTGACGA TGCGGCGCCG AGCGCACACC GGATCTTCGC CGAGGTCGCA GCGATCACCA GCGGGATGGT TCAGCGCGAG CTGATCGATC GGCGGACCGA TCCCGTGACG GCCGGCGAGA AACTCTACGC GCGGCACGGC ACGCGGGGCA TTCGCGGCGA GGTCGAGGAC GGCTTCCCGG CGGTCGCGCG GCACGGTCTG CCGACGCTGC GCGCCGCCAT CGCCGCCGGG CACGGACTGA ACCGCGCGCT GGTTCACACC CTGATCGAGC TGATCGCCGA AGCCGAGGAT TCCACCGTGC TCTGGCGCGG TGGTCCCGAC GCACTGGCTT TCGTCCAGGG CGAAGCCCGG CGCATTCGCG ACCTCGGCGG CGGGCTGACG TCGCGCGGCG TCGAAGCGAT CCACGCCTTC GGCGCGGAAT GCGTCGCGCG CCGGATCAGC GCCGGCGGCG CCGCCGATCT GCTCGCTGTC ACCATCGCCG TCCACCTCAT CGAACACCGA ACGTTTCCGT CGTCGGCGAC GGCCGGATTC GAAACGCTTC ACGCCACAGG AGACCACCCA TGA
|
Protein sequence | MDCSPFHAAD IAPYFADGLA PKAWTIGSAC LSGILLEVAT HPKPGLVTPR SMGAHTDMDQ QTFMLTSAAI APCFHRCASI GFSHRGDAVS ALPLVRAVGR EYDALLMAAS NGVNTQRGAL FALGVTAAAA GRAARDDAAP SAHRIFAEVA AITSGMVQRE LIDRRTDPVT AGEKLYARHG TRGIRGEVED GFPAVARHGL PTLRAAIAAG HGLNRALVHT LIELIAEAED STVLWRGGPD ALAFVQGEAR RIRDLGGGLT SRGVEAIHAF GAECVARRIS AGGAADLLAV TIAVHLIEHR TFPSSATAGF ETLHATGDHP
|
| |