| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3238 |
|---|
| Symbol | |
|---|
| ID | 3911039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3702100 |
|---|
| End bp | 3702876 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885140 |
|---|
| Product | Alpha/beta hydrolase |
|---|
| Protein accession | YP_486845 |
|---|
| Protein GI | 86750349 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.745191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TCTCCGCCGT CGTCGCGCTT GCCGCCTCGC TGTTCTCCGG TTCGGTCGTC
GCCCAACCGG CCAAGTCCGA CCACCCCACC ATCGTCCTGG TCCACGGCGC CTTCGCCGAC
TCCTCGAGCT GGAACGGGGT CGTCTCGATC CTGCAGAGCA AGGGATACAA GACCGTCGCC
GCCGCCAATC CGCTGCGCAG CGTGTCGAGC GACGCGCGCT ACGTGTCCGA CGTCGTCGCC
AGCATCGCGG GTCCGGTGGT GCTGGTCGGT CATTCCTACG GCGGTCAGGT GATCTCGACC
GCCGCCAAAG GCCACGCCAA CGTCAAGTCG CTGGTCTATG TGGCGGCGTT CGCGCCGGAG
GCCGGCGAGG CGGTGGCCGC GCTGGCGGGG AAATTCCCCG GCGGCACGCT CGGCGCGGCG
CTGGCGCCTC CGGTCAAGCT CGCCTCCGGC GGCGTCGATC TGTACATCGA TCAGGCCAAG
TTCCGCGAGC AGTTCGCGCA CGACGTGCCG GCGGCGAACA CCGCGTTGAT GGCGGCCGGC
CAACGCCCGA TCACCGAGGC GGCGCTGACT GAAAAATCCG GCGAGCCGGC CTGGAAGTCG
CTGCCGTCGT ATTTCGTGTA TGGCGACGGC GACAAGAACA TTCCCGCCAA GGCGCTGCAC
TTCATGGCCG GACGCGCGAA TTCCAAGCAC ACCGTGGTGG TCAGCGGCGC CTCGCATGTG
GTGATGGTGT CGGAGCCGCA GGTGGTGGCC GAGCTGATCG AAGAGGCGGC GAAGTAG
|
|---|
| Protein sequence | MSKLSAVVAL AASLFSGSVV AQPAKSDHPT IVLVHGAFAD SSSWNGVVSI LQSKGYKTVA
AANPLRSVSS DARYVSDVVA SIAGPVVLVG HSYGGQVIST AAKGHANVKS LVYVAAFAPE
AGEAVAALAG KFPGGTLGAA LAPPVKLASG GVDLYIDQAK FREQFAHDVP AANTALMAAG
QRPITEAALT EKSGEPAWKS LPSYFVYGDG DKNIPAKALH FMAGRANSKH TVVVSGASHV
VMVSEPQVVA ELIEEAAK
|
|---|
| |