Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3092 |
Symbol | |
ID | 3910893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3524444 |
End bp | 3525271 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884996 |
Product | ABC transporter related |
Protein accession | YP_486701 |
Protein GI | 86750205 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.935227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.896647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCGC GGCCTGCCGG TGCCCGGTCG GTCGAACGGC TCGGCGCCCC TGGCGGCTCC GCCTACATCT CGATCACCGA CGTCGACAAA AGCTATGGCG CCGAGAGCCC CATCGCCGCG CTGAAGGACA TCAATCTCGA TATCAAGGCC GGCGAATTCA TCAGCATCGT CGGCCCGTCT GGGTGCGGCA AGAGCACGCT GCTCAAATGC ATCGCCGGCC TGCAGCCGAT CAGCGCCGGA TCGATTTCGA TCCGCAATCA GCCGGTGAAC GCGCCGCCGG AGGATATGGC GATCGTATTC CAGCGCGACG TGCTGTTCGA CTGGCGCACT GTGCTCGACA ACGTACTGAT GCTGGTCGAA TTCAAGGGAC TGCGGCGCAA GGACTATCAC GAACGCGGGC TCAAGCTGCT GCGCGAGTAC GGACTCGACG GCTACGCGCA GCGCTTTCCG TGGGAACTGT CCGGAGGCAT GCGCCAGCGC GTGGCGATCT GCCGCGCAAT AATCGTCGAT CCAGACCTGC TTCTCATGGA CGAGCCGTTC GGCGCGCTCG ACGCGATGAC CCGCGACGAC TTGAACGCGG AACTCGAGCG ATTGTGGTAC GAGACGCGCA AGACCGTCGT CTTCATCACT CACGGGATCG ACGAGGCCGT CTATCTCGGA GACCGCGTCG TGGTGATGGC GCGCAATCCC GGCCGGATCG CCGAGATCGT CGAGATCGAT ATTCCGCGAC CGCGCCCGCT CAGCATTCGT CAAACCGAGG ACTTCGGCAA ATATGTCCAG CACATCCGTC ATCTCTTCGC ATCGATGGGG CTCGTCAAAG CTGAGTAA
|
Protein sequence | MTARPAGARS VERLGAPGGS AYISITDVDK SYGAESPIAA LKDINLDIKA GEFISIVGPS GCGKSTLLKC IAGLQPISAG SISIRNQPVN APPEDMAIVF QRDVLFDWRT VLDNVLMLVE FKGLRRKDYH ERGLKLLREY GLDGYAQRFP WELSGGMRQR VAICRAIIVD PDLLLMDEPF GALDAMTRDD LNAELERLWY ETRKTVVFIT HGIDEAVYLG DRVVVMARNP GRIAEIVEID IPRPRPLSIR QTEDFGKYVQ HIRHLFASMG LVKAE
|
| |