Gene RPB_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3092 
Symbol 
ID3910893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3524444 
End bp3525271 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID637884996 
ProductABC transporter related 
Protein accessionYP_486701 
Protein GI86750205 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.935227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.896647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GGCCTGCCGG TGCCCGGTCG GTCGAACGGC TCGGCGCCCC TGGCGGCTCC 
GCCTACATCT CGATCACCGA CGTCGACAAA AGCTATGGCG CCGAGAGCCC CATCGCCGCG
CTGAAGGACA TCAATCTCGA TATCAAGGCC GGCGAATTCA TCAGCATCGT CGGCCCGTCT
GGGTGCGGCA AGAGCACGCT GCTCAAATGC ATCGCCGGCC TGCAGCCGAT CAGCGCCGGA
TCGATTTCGA TCCGCAATCA GCCGGTGAAC GCGCCGCCGG AGGATATGGC GATCGTATTC
CAGCGCGACG TGCTGTTCGA CTGGCGCACT GTGCTCGACA ACGTACTGAT GCTGGTCGAA
TTCAAGGGAC TGCGGCGCAA GGACTATCAC GAACGCGGGC TCAAGCTGCT GCGCGAGTAC
GGACTCGACG GCTACGCGCA GCGCTTTCCG TGGGAACTGT CCGGAGGCAT GCGCCAGCGC
GTGGCGATCT GCCGCGCAAT AATCGTCGAT CCAGACCTGC TTCTCATGGA CGAGCCGTTC
GGCGCGCTCG ACGCGATGAC CCGCGACGAC TTGAACGCGG AACTCGAGCG ATTGTGGTAC
GAGACGCGCA AGACCGTCGT CTTCATCACT CACGGGATCG ACGAGGCCGT CTATCTCGGA
GACCGCGTCG TGGTGATGGC GCGCAATCCC GGCCGGATCG CCGAGATCGT CGAGATCGAT
ATTCCGCGAC CGCGCCCGCT CAGCATTCGT CAAACCGAGG ACTTCGGCAA ATATGTCCAG
CACATCCGTC ATCTCTTCGC ATCGATGGGG CTCGTCAAAG CTGAGTAA
 
Protein sequence
MTARPAGARS VERLGAPGGS AYISITDVDK SYGAESPIAA LKDINLDIKA GEFISIVGPS 
GCGKSTLLKC IAGLQPISAG SISIRNQPVN APPEDMAIVF QRDVLFDWRT VLDNVLMLVE
FKGLRRKDYH ERGLKLLREY GLDGYAQRFP WELSGGMRQR VAICRAIIVD PDLLLMDEPF
GALDAMTRDD LNAELERLWY ETRKTVVFIT HGIDEAVYLG DRVVVMARNP GRIAEIVEID
IPRPRPLSIR QTEDFGKYVQ HIRHLFASMG LVKAE