| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3077 |
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| Symbol | |
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| ID | 3910878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3507825 |
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| End bp | 3509363 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884982 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_486687 |
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| Protein GI | 86750191 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCC GATGGAAGAA CCTCGGAGAT TTGGTGGATC GCTCGCGCGG TCTCGATCGT
CCCGCGATCA TCGATCTGCG GTCCCCGGAG CCGAGGGTCT GGACCCATAG CGAGATCGAT
AGGCTCGGAA ATGGCGTGGC GTCTTATTTG ACCGGGCTTG GCTTGGCGCG TGGAACGACG
GTCGCCATTC TCTCGCTCAA CCGTGCGGAG TACATTGCGG CGTATTTCGG CATCATGCGC
GCCGGCTTCG TCGCGCTGCC GGTCAACACC AAGCAGCCGG CCGAAACGAT CGATTTTGTG
CTGCGCGACT CCGACACCAA GTTTGCCTTC GTCGATACAG CCTCGCGTCA GCTTCTGCCG
GCGGGCTTAG CGTTCCTCGA CTTCGACGAG GCGGGACCCG AAGGTTTTGC CGCGCGCATC
GTGCCGGGCG AATTCGAAAC GGTGGAGGCG CAGCGGGGCG AACTTGGACA GATCCTCTAC
ACCTCCGGCT CCACCGGACG GCCGAAGGGC GTCGAGCTCA GCCACGACAG CCAACTGTGG
GCGCTTGCCG CCAAGGGCGT CAGCGCCGAC ACCTGCGACG AGGTCTACAT CATCGCCCAG
CCGCTGTTCC ACATGAACGG TCTGTTCGGC GCCAAGAGCA TCTTCGCCAG CAATGCGAGC
ATGGTTCTGA TGCCGGGCTT CGACAGCCGG CGCTATCTGC AGGCCATGGC GGATCATGGC
GTCACCGCGG TTACTGCGGT GCCGACAATG TTCGCGCGGC TGCTGCGCGA GCCCGACCTC
TTGGCCGCCA ACGATTATAG CCGGCTGAAG CGGCTGGCGC TGGCCTCTGC GCCGATCACC
AGGGCCATGG CCGACAAGAT TCAGGCGGCG TTTCCGCATG CCATGCTGAC TCACGGCTAC
GGCACCACGG AGGCCGGCCC GTCCGTGTTC GGCCCTCATC CGGAGGGCAA GCCGCTGCCG
CCGCTCACGA TCGGCTATCC GATCGACCCG TCGATGGTGA AGCTGGTCGA CGGCCCGAAC
GACAACGAGG GCGTGCTGCT GATGCGCAAT CCGGCGCTGA TGACGCGCTA TCGCGGCATG
CCGGACAAGA CCGCCTCGGT GATGCGTGAC GGCTGGTACT ACAGCGGCGA TGTCATGCGT
CGCGACGAGG ACGGCTTCTA TTATTTCATC GGCCGGGCCG ACGATATGTT CGTCTGCGGC
GGCGAGAACA TCTATCCCGG CGACGTCGAG AAGATGCTGG AGACGCATCC GGCAGTGCGC
CAGGCCGCGG TCGTTCCTCT CGCCGACGAG GAGCGCGGAC AGATGCCGGT GGCTTTCCTC
GTGTTGGCCG ACGGCCAAAG TGCCACGACC GAAGACATCA AGGCCTACGC GCTGCGCAAC
GGGCCGACCT ATCAGCATCC GCGCCGCGTC AGCTTCGTGG CCGATCTGCC GTGGGCCGGC
ACCAACAAGA TCGATCGCGC GGCGCTGATC CGCGAGGCCA AGCAACTGGA AGCCACCAAT
GGCTGGTCGG TTTCCTCCCA CGCCGAAGCC GCCGCATGA
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| Protein sequence | MSFRWKNLGD LVDRSRGLDR PAIIDLRSPE PRVWTHSEID RLGNGVASYL TGLGLARGTT
VAILSLNRAE YIAAYFGIMR AGFVALPVNT KQPAETIDFV LRDSDTKFAF VDTASRQLLP
AGLAFLDFDE AGPEGFAARI VPGEFETVEA QRGELGQILY TSGSTGRPKG VELSHDSQLW
ALAAKGVSAD TCDEVYIIAQ PLFHMNGLFG AKSIFASNAS MVLMPGFDSR RYLQAMADHG
VTAVTAVPTM FARLLREPDL LAANDYSRLK RLALASAPIT RAMADKIQAA FPHAMLTHGY
GTTEAGPSVF GPHPEGKPLP PLTIGYPIDP SMVKLVDGPN DNEGVLLMRN PALMTRYRGM
PDKTASVMRD GWYYSGDVMR RDEDGFYYFI GRADDMFVCG GENIYPGDVE KMLETHPAVR
QAAVVPLADE ERGQMPVAFL VLADGQSATT EDIKAYALRN GPTYQHPRRV SFVADLPWAG
TNKIDRAALI REAKQLEATN GWSVSSHAEA AA
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