| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3034 |
|---|
| Symbol | |
|---|
| ID | 3910833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3456573 |
|---|
| End bp | 3457469 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637884940 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486647 |
|---|
| Protein GI | 86750151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.317947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG TTCAAGACGC TTCGCGCGGC CGCATGTCGC CGCTCGGGCT GGCGTGTCTC
GGCGTGGCCT CGATCGGCTG GGGCCTGAAT TTCCCGATCA TGAAGCACCT GCTGACCGAA
CTGCCGCCGC TGTCCTCGCG CGGCCTGTCG GGGATCATCG GCGCCATCGC GCTGGGGGCG
ATCGCGGTCT GGCGCGGGCA GACGATCACG GTGCCGCGTG GCCTATGGTC GCGACTTGTC
CTGGTGTCGC TGCTGACGAT CGGCGGATGG GTCGCGTGCA TGGGGCTGGC GCTGTTGTGG
CTGCGGGCAA GTGACGCGGC GGTGCTCGGC ATTTCGATTC CGTTGTGGGT CGTGTTGCTG
GCGTGGCCGG TGCTCGGCGA GCGGCCCTCG GCGGTTCGCG CGGTCACCTT GCTGATCTCG
CTCGGCGGCA TCACGGTGCT GATCGGCGGC GGTGGCTTCG ACGCCAGTCT CGACAAGCTG
CCCGGCATCC TGTTCGCGCT CGCCGGCGCC ATCTGCGTCG CATCCGGCAC CGTGCTGACG
AAACACTTCC CTCTGGCGCT GCCGCCTTTG TCGCTCGCGG CCTGGCAGAT CGGGCTGGGC
TGCATCCCCG TGGCGGTTGC CGGGCTCGCG CTCGAGGATC CGCATTTCGC GGCTCTGTCG
ACGATCGGCT GGGCGTCGAT GGTCTACATG ACGCTGGTGC AGTTCTGCGT CTGCTACGTC
TGCTGGTTCG TGGCGCTCGA GCGCTTGCCG GCGGCGACGG CCTCGATCGG CACGCTGCTG
GTGCCGGTGG TCGGCGTGTT GGCGGCGGCG GCGATGCTGC ACGAGCCGCT CGGGCTGCGC
GAAGTGATCG CGCTGACGGT GACTCTGGCC GGCGTTGCGC TGGCCTTGCG ATCCTGA
|
|---|
| Protein sequence | MTTVQDASRG RMSPLGLACL GVASIGWGLN FPIMKHLLTE LPPLSSRGLS GIIGAIALGA
IAVWRGQTIT VPRGLWSRLV LVSLLTIGGW VACMGLALLW LRASDAAVLG ISIPLWVVLL
AWPVLGERPS AVRAVTLLIS LGGITVLIGG GGFDASLDKL PGILFALAGA ICVASGTVLT
KHFPLALPPL SLAAWQIGLG CIPVAVAGLA LEDPHFAALS TIGWASMVYM TLVQFCVCYV
CWFVALERLP AATASIGTLL VPVVGVLAAA AMLHEPLGLR EVIALTVTLA GVALALRS
|
|---|
| |