| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2962 |
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| Symbol | |
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| ID | 3910761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3372757 |
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| End bp | 3374598 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884868 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_486575 |
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| Protein GI | 86750079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.972235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGC CCGCATCCGC ATTGCCGCCT GATCCCGTGT CGGCGTTTCT CGGCGTGACC
CGTTCCGCCA CCGGCAAGCT GTGGCGCGAC CGGCTGGATG CGCGCGGCAC CGCCAAGGCG
CAGGCGATCG CGCAGCGCTA TCAATTGCCG GAGATGCTGG CGCGGGTGAT CGCCGGGCGC
GGCATCGAGA TCGACGCGGT CGCCGATTTC CTCGACCCGA CCATCCGCAA GCTGATGCCC
GATCCATCGA CGGTGACGCA GATGGAGGCC GGCGCCAGCC GCATCGCCGA CGCCGCGACG
AAACGCGAGA AGGTGGCGAT CTTCGGCGAT TACGACGTCG ACGGCGCGAC CTCGGCCGCA
TTGCTGGCCT GGCATCTGCG GCATTGCGGG CTCGATCCGC TGATCCACAT TCCCGACCGC
ATCTTCGAGG GCTACGGCCC GAATGTCGAC GCCATCCGGA TGCTGGCGGA CAAGGGCGCG
ACGCTGCTGA TCACGGTGGA TTGCGGCACC ACCAGCCTCG AGCCGCTGGC CGAGGCGCGC
CGGCTCGGCA TGAGCGTGGT GGTGATCGAT CATCACCAGA CCGCCGACGA ACTGCCCGAG
GTCGACGCGC TGATCAATCC GAACCGGCCC GATGATCTGT CCGGCCTCGG CCATCTCGCC
GCCGTCGGGC TGGTGATGAT GACGCTGGTC GCGGTCAATC GCGAGCTGCG CCATCGCGGC
TTCTGGACGC TGGAGCGGCC GGAGCCGAAT CTGCTCGACA TGCTGCATCA CGTCGCGCTC
GGCACTGTCG CCGACGTGGC GCCCCTGATC GGGCTCAACC GCGCCTTCGT CGCCAAGGGG
CTGATCGCGC TGCGCCGCCG CGATCATGTC GGCCACACCG CGCTGATGGA CGTGGCGCGG
CTCAACGGGC CACCCGAAGT CTGGCATCTC GGCTTCATGC TCGGGCCGCG GATCAATGCC
GGCGGCCGGA TCGGCCGCGC CGATCTCGGG GTGCGGCTGC TGCTCGAAGG TGATGTTTCG
GAAGCCGCGC GGATCGCCGC CGAACTCGAT CGCCTCAACA CCGAGCGCCG CGTCATCGAG
CAACACGCCG AAGCGCAGGC GGAGGCCGAG GCGATCGCCG CGCTCGGCCT CGAGGACAAG
GGCGCGGTGA TCGTCACCGC GTCCGAGGGC TGGCATCCCG GCGTGGTCGG CCTCGTCGCG
TCGCGGCTGA AGGAAAAATT CGGCCGGCCG GCGTTCGCCA TCGCGCTGGA GCCCGGCGGC
ATCGGCACCG GCTCGGGCCG CTCGATCGGC GGCGTCGATC TCGGCCGCGC GGTGCGCAAC
GCCGTGACCG AGGGCATCCT GATGAAAGGC GGCGGCCACG CGATGGCCGC CGGCGTGACG
CTGCGCAAGG AACGCCTCGC CGAATTCCGC GGCTGGCTCG AAACCGCGCT CGCCGCCGAC
GTCGCCAAGT CGCGCCACGT CAACGAATTG TCGATCGACG GCGCGGTGTC GGCACGCGGT
ATCACGCCGG AATTCGCCGC CACGCTCAAT CGCGCCGGGC CGTTCGGCGC CGGCAATCCC
GAGCCGGTCA TCGCGCTGCC GGCGCATCAA CTGGTCTATG CCGACGAAGT CGGGCAGGCG
CATCTGCGGC TGCGCTTCAA ATCCGGCGAC GGCGCCATCG TCAACGGCAT TGCATTCCGC
AGCGTCGGGC AGAAGCTCGG GCAGGCGCTC GCCGAGAACC GCGGCCATCC GCTGCATGTC
GCCGGCTCGC TCGCGATCGA CCGCTGGCAG GGCGCCGAAC GCGTGCAGTT TCGCGTGATC
GACGTCGCGG TGCCGGATCC CGGGCCGGCG ATGATCAGAT AG
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| Protein sequence | MTLPASALPP DPVSAFLGVT RSATGKLWRD RLDARGTAKA QAIAQRYQLP EMLARVIAGR
GIEIDAVADF LDPTIRKLMP DPSTVTQMEA GASRIADAAT KREKVAIFGD YDVDGATSAA
LLAWHLRHCG LDPLIHIPDR IFEGYGPNVD AIRMLADKGA TLLITVDCGT TSLEPLAEAR
RLGMSVVVID HHQTADELPE VDALINPNRP DDLSGLGHLA AVGLVMMTLV AVNRELRHRG
FWTLERPEPN LLDMLHHVAL GTVADVAPLI GLNRAFVAKG LIALRRRDHV GHTALMDVAR
LNGPPEVWHL GFMLGPRINA GGRIGRADLG VRLLLEGDVS EAARIAAELD RLNTERRVIE
QHAEAQAEAE AIAALGLEDK GAVIVTASEG WHPGVVGLVA SRLKEKFGRP AFAIALEPGG
IGTGSGRSIG GVDLGRAVRN AVTEGILMKG GGHAMAAGVT LRKERLAEFR GWLETALAAD
VAKSRHVNEL SIDGAVSARG ITPEFAATLN RAGPFGAGNP EPVIALPAHQ LVYADEVGQA
HLRLRFKSGD GAIVNGIAFR SVGQKLGQAL AENRGHPLHV AGSLAIDRWQ GAERVQFRVI
DVAVPDPGPA MIR
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