Gene RPB_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2720 
Symbol 
ID3910513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3105656 
End bp3106432 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID637884620 
ProductIon transport protein 
Protein accessionYP_486333 
Protein GI86749837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.56603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.249922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACG CCGAGCTGAA ATCCTTCCTC CGCGAACTCT ACGAAGGCGC CTCGCCGCGT 
GGGGTGGTGT TTCGCTATGG CGTGCTGGCG TTCGACATCG TCACGGTGCT GTTCATCATC
GGCACCTCGT TCGTGCCGTC GAACGACATC GTCGAGACGC TGGACGTGGT GTTCGGCGCG
CTGATCCTGG TCGATTTCGC CGCAAGGCTG CTGATCAGCC GGCACCGGAT GAAGGATTTC
ACCCGGCTCG CGACCTGGAC CGACATCGTG GCGATCGTGT CGTTTCTGGC GCCGCTGGCC
GGCGAGGGCG GCGGCTTCCT GCGCATCCTG CGCACGCTGC GGCTGCTGCA CGACTATCAG
ATGCTGTCGC GGCTGCGCAA CGACAGCGAC TTCTTCCGCC GCAACGAGGA CGTCGTGATC
GCCGTGACCA ATCTGGCGGT GTTCATCTTC GTGATGACGG CGATCGTCTA CGAGACCCAG
CGCTCGCACA ATCCGCAGAT CGCCCACTAC GCCGATGCGC TGTATTTCAC CGTCACCGCG
CTGACCACCA CCGGCTTCGG CGATATCACG CTGCCGGGCA CGCTCGGCCG GCTGATCAGC
GTCGCCATCA TGATCTTCGG CGTCACGCTG TTCTTCAATC TGGCGCGGGC GCTGATCAGC
CCGAACAAGG TGCGCTTTCC CTGCCCGGTC TGCGGGCTGC AGCGCCACGA TGCCGACGCA
GTGCACTGCA AGGCCTGCGG CACCGTGCTG AACATTCCCG ACGATGGGCT CACATAG
 
Protein sequence
MTYAELKSFL RELYEGASPR GVVFRYGVLA FDIVTVLFII GTSFVPSNDI VETLDVVFGA 
LILVDFAARL LISRHRMKDF TRLATWTDIV AIVSFLAPLA GEGGGFLRIL RTLRLLHDYQ
MLSRLRNDSD FFRRNEDVVI AVTNLAVFIF VMTAIVYETQ RSHNPQIAHY ADALYFTVTA
LTTTGFGDIT LPGTLGRLIS VAIMIFGVTL FFNLARALIS PNKVRFPCPV CGLQRHDADA
VHCKACGTVL NIPDDGLT