Gene RPB_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2233 
Symbol 
ID3909016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2544692 
End bp2545675 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content66% 
IMG OID637884128 
Productputative FecR 
Protein accessionYP_485849 
Protein GI86749353 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.761744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGG ACGGCAATCC GGTGGCAGAT GCGGCGGGGT ATCCGACGTT GCGGTTCGAA 
GCGCGGCGCT GGCTGGTTCG GATCACCTCC GGCGAGGCCA CGGCCGTGGA CGCCGACGCC
CTGAAGCGCT GGTGCGCGCA GAGCCCGTCG CATGCACGCG CCTTCGCCGA GGTCAATCTC
CTCTGGGATA ACGTCGAGGT GGCCGCGCAT TTGCCGTCGG TCGCCGCGTC GTCCCAAATC
GCGGTCCGGG GCGAAGCACC CCAATCGCGG CGCTGGGTCC TCGGCGCGAT GGCGGCATCC
GCTGCAGCGG CGGCGGGCGC TTTCGCCGTC GATCCCCCGT TCGGACTTTG GCCGTCGTTG
CCGGAACTCG GCGCCGACTA TCGCACTTTA ACCGCCGAAC GTCGCGACAT TGCGATGCCG
GACGGTGTCA AAATCGAACT CAACACACGC AGTAGCCTGA ACATCGTCGC GGGCCAGTCG
GGGCAGCAGA TCGAGCTGAT TGCCGGCGAG GCGGCGATTT CGTGTCCGCA TCAGACGGTG
CTGTCGGTGC TCGCGGGCGG CGGCGTGGTG CGAGCCGCGG ACGCGCAATT CAACATTCGC
AGCGATGCGG CAGGATCGAT CGTCACCTGT CGACGCGGCG TGGTGTCGCT GAACTATGCT
CGACGATCCG TCAGCGTCCG AGAGGGGCAT CAGGCGTCTT ACGTGGACGG CCGGGTCGGC
CCGGTCATCG CGGTCGAGGC CGCTGCAGTG ATGGCTTGGC GCGAAGGTCA GTTGGTGTTT
CGGCGGACCC CGCTGGCGGA GGCCGTCGAC GAGGTCAATC GCTACCGCAG CGGCCGTATC
GTTCTGATGA ACGAGACGCT CGGTCGTCGT CTGGTCGATG CCAAAATTCC GATTGATCGC
GTCGACAGTT TGATCGCGTT GATTCAGCAG GCCTATGGCG CCAAAGTGAT ATCCCTGCCG
GGTGCAATCG TCCTCATCTC ATGA
 
Protein sequence
MEEDGNPVAD AAGYPTLRFE ARRWLVRITS GEATAVDADA LKRWCAQSPS HARAFAEVNL 
LWDNVEVAAH LPSVAASSQI AVRGEAPQSR RWVLGAMAAS AAAAAGAFAV DPPFGLWPSL
PELGADYRTL TAERRDIAMP DGVKIELNTR SSLNIVAGQS GQQIELIAGE AAISCPHQTV
LSVLAGGGVV RAADAQFNIR SDAAGSIVTC RRGVVSLNYA RRSVSVREGH QASYVDGRVG
PVIAVEAAAV MAWREGQLVF RRTPLAEAVD EVNRYRSGRI VLMNETLGRR LVDAKIPIDR
VDSLIALIQQ AYGAKVISLP GAIVLIS