Gene RPB_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2218 
Symbol 
ID3907960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2530763 
End bp2531731 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID637884113 
Productputative FecR 
Protein accessionYP_485834 
Protein GI86749338 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0319287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.363906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC TCGATGCCGT GCAGCGTCAG GCGCTCGCCT GGGTAATCCG GCTGAATTCC 
GGCGGCGCGA CGTCGGACGA CGCTGCGGCA TTGGCGCTGT GGCGCAAGCG CGGGCCGGAA
TACGAGGATG CATTTCGAGA GGCAGTCCAA TTTTGGCGAA CTTTCGGCGA GGCGACCCGC
GAATTGGTCG GCCGGAACGA GGCGCGCGCG ATGCCTCCGG TTCGGTCGCG GCCGGTCCTC
AGCCGCCGGC TGCTGATCGG TGGTGGCGTC GCCGCAGCCG CTTCACTCGG CGGCATCTAC
GTCTCGAAGC ATCCGCCGCT CGGGTTGTGG CCTTCGATCG AGGAGCTTGC GGCCGACCAC
CGCACCGGCA AAGGCGAGCG CCGCAAGATC GAGGTGGCCA AGAATGCGGT CATGACTCTG
AACACGCAGA CCGCGGTGTC GGTGCGGTCC GCATCGGCGA CACCTCGCGT CGCGCTGATT
TCGGGCGAAG CGGCGGTCGA TGTCAGCCGT GATGTCGGGG CGATGGTGAT CGACGCGGCG
GGAGGACGGA TCGAGGCGCA GCAGGCCAGC TTCAACGTCC GATGCGTCGA CCAGAGCGTC
TCGGTGGCGT GTTTCACTGG CGACGTGCAG GTCGAATGGG AGGGCCGGCG AGCGGTGCTG
GCTGCGTCTC AGCAACTGAC GTATTCCGAA GAGAGCGGCC TCACGGCGGT TGCGCCTGCC
GATGCCGAAC AGGCCACGGC GTGGCAGCGC GGCCTGTTGC TGGTTCACGA TTGGCCGGTC
GACCGATTGG TCGCCGAAAT CAACCGCTAT CGGCCCGGTC GTATCGTGAT CATGAACAGC
AATCTTGGTC GCCGCATGAT CTCCGGGACG TTCTATCTCG ACCATCTCGA CGATTTCGTC
GCGCAGGTCC ACGGACTGTT CGGCGCCACT GCGCGAACGC TACCGGGCGG AATTTTGCTG
CTGAGCTGA
 
Protein sequence
MPELDAVQRQ ALAWVIRLNS GGATSDDAAA LALWRKRGPE YEDAFREAVQ FWRTFGEATR 
ELVGRNEARA MPPVRSRPVL SRRLLIGGGV AAAASLGGIY VSKHPPLGLW PSIEELAADH
RTGKGERRKI EVAKNAVMTL NTQTAVSVRS ASATPRVALI SGEAAVDVSR DVGAMVIDAA
GGRIEAQQAS FNVRCVDQSV SVACFTGDVQ VEWEGRRAVL AASQQLTYSE ESGLTAVAPA
DAEQATAWQR GLLLVHDWPV DRLVAEINRY RPGRIVIMNS NLGRRMISGT FYLDHLDDFV
AQVHGLFGAT ARTLPGGILL LS