| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2001 |
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| Symbol | |
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| ID | 3909507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2273447 |
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| End bp | 2274436 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883895 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_485620 |
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| Protein GI | 86749124 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGA CAATTCTCTT CGGCGGCACC AGCAAGGAGC GCCTGGTTTC GGTCGCCTCG
GCGCAGGCGC TGCACGCCGC GCTGCCCGAT GCCGAATTGT GGTTCTGGAA CGACGACGAC
AGCGTCCACG CGGTGACCGC GGAGGCGCTG CTGGCGCATG CGCGGCCGTT CGAGGAGGCG
TTTCGGCCGG CTGGCGAAAA CATCGGTCCG CTGGAGCGCG CGCTCGATCG CGCGGCGATC
GAACAGCGGC TGCTGGTGCT GGGTCTGCAC GGCGGTGTCG CCGAGAACGG CGAGTTGCAG
GCGATGTGCG AGATGCGCGG CGTGCCGTTC ACCGGGTCGG GCGCGGCGGC GTCGCATCTC
GCCTTCGACA AGGTGGCCGC CAAGCGGTTC GCCGCGATCG CCGGCGTGCG CGCGCCGGCC
GGCATCGCGC TGGCGGAGGC CGAGGCGGCG CTGGCCGCCC ACGGCCGGCT GATCGCCAAG
CCGGCCCGCG ACGGGTCGAG CTACGGCCTG TTCTTCATCA ATGCGAAGCA GGACCTGGTC
GCGGTGCGCG ACGCGGCGAG GTCCGAGGAC TATCTGATCG AGCCGTTCGT CTCCGGCATC
GAAGCGACCT GCGGCGTGCT GGAGCAGGCC GACGGCTCGC TGCTGGCGCT GCCGCCGATC
GAGATCGTGC CGGCCGACGG CGGCTTCGAC TACACCGCGA AATATCTCGC CAAATCGACC
CAGGAGATCT GCCCCGGCCG GTTCGCGCCG CAGATCTCGG CGAGGATCAT GGAGGATGCC
GTGAAGGCGC ATCGGGTGAT GGGCTGCCGC GGCTATTCGC GCTCCGACTT CATCGTCGTC
GCCGACGGTC CGATCTTTCT CGAGACCAAT ACGCTGCCCG GACTGACCAA GGCCTCGCTC
TATCCCAAGG CGCTGCAGGC GCAGGGGATC GCCTTCGTCG ATTTCCTCCA CGGCCAGATC
GCGCTCGCCG AACGCGGCGC CCGGCGTTAA
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| Protein sequence | MRQTILFGGT SKERLVSVAS AQALHAALPD AELWFWNDDD SVHAVTAEAL LAHARPFEEA
FRPAGENIGP LERALDRAAI EQRLLVLGLH GGVAENGELQ AMCEMRGVPF TGSGAAASHL
AFDKVAAKRF AAIAGVRAPA GIALAEAEAA LAAHGRLIAK PARDGSSYGL FFINAKQDLV
AVRDAARSED YLIEPFVSGI EATCGVLEQA DGSLLALPPI EIVPADGGFD YTAKYLAKST
QEICPGRFAP QISARIMEDA VKAHRVMGCR GYSRSDFIVV ADGPIFLETN TLPGLTKASL
YPKALQAQGI AFVDFLHGQI ALAERGARR
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