| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1924 |
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| Symbol | |
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| ID | 3908003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2196537 |
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| End bp | 2197772 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883818 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_485543 |
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| Protein GI | 86749047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.202322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCG TCGCCGCTGT CGCCGCGATT GGCGCGGCGC TGTGGTTGAC GCTGGTCCCG
GCCGCCGCAC AGGCGGCCGA TGCCGGCTTC ACGCGCTTCG TCGCCTCGCT GTGGCCCGAG
GCGCAGCAGG CGGGCGTTTC CCGCGCGACC TTCGATGCCG TAACGGCGGG GCTCGAGCCG
GACTACAAGT TGCCGGACCT GATCCTGCCG GGACGGCCGA AGACCGGGGC GCCGTCCCAG
GCCGAGTTCG TGCAGGTGCC GGCCGACTAT CTCAAGGAAG CGCGGATCGA AAGTCTGGCC
GCATACGGCC GCGGCCTGCT GCAGAAATAT CGCCCCACGC TCGCCGCGAT CGAGCAGCGC
TTCGGCGTGC CGGCGACGGT GGTTCTGGCG ATCTGGGGTC GCGAGACCGA TTTCGGCCGG
CACAGGCTGC CCTATGATGC CGTCCGCGTG CTGGCGACGC AGGCCTATGT CGGACGTCGC
AAGGAGCAGT ACCGCCTCGA GCTGATCGCG GCCTTGAAGC TGATCAGCGA CGGCGTGGTG
ACGCGCGCCG ACATGCGCTC GTCCTGGGCC GGCGCCACCG GGCTGACGCA GTTTCTGCCG
ACCGAACTCG ACAAGCACGG CGTTGATTTC GATCGTGACG GCCGCGTCGA TATCTGGCGC
TCGGTGCCGG ATGCGCTGGC GTCCGCCGCG CAGCAACTCG TCAACAAGGG CTGGAAGCCG
GGCGTGCGTT GGGCTTACGA AGTCCGCGCA CCGGCCAATG CCGATTGCAC CCGGGGCGTG
CCCGAAGTCA GCCAGCCGAT CGGGCAGTGG CTGCGCGAGG GATTTGCGCT GGCGCGCGGC
GGCAAGCTCG GCGCCGGCGA ACTGGCGGAG CCCGCGTCGC TGCTGCAGCC GGAGGGCATC
TACGGTCCCG CCTTCCTGAC GACGAACAAC TATTTCGTCA TCAAGCAGTA CAATTTCTCC
GACCTCTACG TGCTGTTCGT CGGCCATCTC GCCGACCGCA TCACCGATCC GCGGCCGTTT
GCGACGCCAT GGGCGGCGAC GAAGCAGCTC CGCACCGCCG ATGTCGAAAC GATGCAAAAC
GAGCTGACGC GGCTGGGCTT CTACAACGAC AAGATCGACG GCAAGGCCGG GATGCTGACC
CGCGCCGCGC TCGGCGCCTA TCAGAAGTCC GCGCGACTGA AGCTCGATTG CTGGCCGAGC
GAAATGGTGC TGCGTTCGCT TCAGACCGCG CGGTAA
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| Protein sequence | MRVVAAVAAI GAALWLTLVP AAAQAADAGF TRFVASLWPE AQQAGVSRAT FDAVTAGLEP
DYKLPDLILP GRPKTGAPSQ AEFVQVPADY LKEARIESLA AYGRGLLQKY RPTLAAIEQR
FGVPATVVLA IWGRETDFGR HRLPYDAVRV LATQAYVGRR KEQYRLELIA ALKLISDGVV
TRADMRSSWA GATGLTQFLP TELDKHGVDF DRDGRVDIWR SVPDALASAA QQLVNKGWKP
GVRWAYEVRA PANADCTRGV PEVSQPIGQW LREGFALARG GKLGAGELAE PASLLQPEGI
YGPAFLTTNN YFVIKQYNFS DLYVLFVGHL ADRITDPRPF ATPWAATKQL RTADVETMQN
ELTRLGFYND KIDGKAGMLT RAALGAYQKS ARLKLDCWPS EMVLRSLQTA R
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