Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1834 |
Symbol | |
ID | 3908993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2099051 |
End bp | 2100565 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637883728 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_485453 |
Protein GI | 86748957 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0259899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCT TTGACGTAGT GGTGATCGGC GCCGGCCTCG GCGGCCTGAC CGCGGGCGCG ATCCTCGCGC ACGAGGGCCG CAAGGTGCTG GTGCTGGAGC GCGGCAATTC GGTCGGCGGC GCGGCGTCGA GCTACAAGGT CGGCGATCTG TTCGTCGAGG GCTCGCTGCA TATCACCGGC GATCCGCTGC ATCCGCGCGA TCCCAAGCAC GCCGCGCTCG GCCGCGCCGG CGTGCGCGAC GCGGTGGCAT TCGTTCCCGC CGGCGCGCTG TACGAGATCC GCGGCGGGCC GCTGGCGCAG CCCTTCGTGC TGCCGGATGA TTTCGCCGGC GCCCGCATGG CGCTGCTGGC GCGGTTTCCC GACGCTCGCC GCGGCATCGA ACAATTCCTC GGCGAGATGC AGCGGCTGGC TTCGGCCGCC GGCGACGGCG GGCTCGACGC CGTGTTCGCG CTGGCGCCGG AATTTCCCGA CTGGTCGTCG TCGCTGGCCG ACAAGCTGCA GGCGCTGTTC GGCGACGACG AAGCGCTGAA ATGCGCGATC GCCGGCAACC TCTCCTACTT CCACGACGAC CCCGCCACGC TGTGGTGGGT TCCGTTCGCG CTGATGCAGG GCAGCTTCCT GTTGACCGGC GCGCGCTACG TCCAGGGCGG CTCGCAGCGG CTGTCGAGCG CCCTCGCCCG CGCGATACGC AAGGGCGGCG GCGATGTGAT GCTGCGCCGC GCCGTCAGCG GCATCGCGAT GGGTGAGCCC GGCGCGATCC ATCGCATCGC CCACACCGCG CGCGACGGCA GCGATCCGCA ATCGGTCGAA GCGCTGACGG TGATCGGCAA CGCCGCGCCG GGCGCGCTCG CGGCACTGAT GCCCGATGCG CAGGGCCAGC GGCTCACCGA GAGCTATGCC GGCCGGACGC TGTCGCTGTC GCTGTTCGCG CTGACGCTGG GCCTGTCCCA GCCGCCGCGC GACTTCGGCG TCACCAGCTA CTCGACGCAG TTGCTGCCGG ACTGGATGGA GACGCTCGCC TGCTACGCCG ACGGCAAGGC GCTGATGGCC GGCGAGCCCG CCGAGCGGAT GCCGCCGCTG GCGATCGCCG ACTACGCCGC GATCGACTCC GGCGTGCCGT CGCCGCCTTT TGTGCTGTCG GTGGTCGGGC CCGACCAGAT CGCGAACTGG AGCGGCCTCG ATCAGGACGA CTACCGCGCC AAGCGCGGCC GCTGGCAGCA GGCGATCGTC GCCCATCTCG ACCGAAACTA TCCGGGATTG GCCGGCGCGG TGACCGCGGC CTCGTTCAAC GTCGCGCTGT CGGTGCAGCA ATATCTCAAC GTGCCGCAGG GCTCGGTCTA CGGCTTCGCG CCGCTGCCGC CGAACGACAG CGGCGCGCCG TATCGGTCGC CGCGCACGGT TCTGCCGGGG CTGTATCTGT CGTCCGCCTA TGCGGGCCTC GGCGGCTACA GCGGCGTGGT GCAGGCGGCG GCGGCATGTG CCGACGCCAT CCTGCGCGAC GGCCCGACGA GTTAG
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Protein sequence | MTRFDVVVIG AGLGGLTAGA ILAHEGRKVL VLERGNSVGG AASSYKVGDL FVEGSLHITG DPLHPRDPKH AALGRAGVRD AVAFVPAGAL YEIRGGPLAQ PFVLPDDFAG ARMALLARFP DARRGIEQFL GEMQRLASAA GDGGLDAVFA LAPEFPDWSS SLADKLQALF GDDEALKCAI AGNLSYFHDD PATLWWVPFA LMQGSFLLTG ARYVQGGSQR LSSALARAIR KGGGDVMLRR AVSGIAMGEP GAIHRIAHTA RDGSDPQSVE ALTVIGNAAP GALAALMPDA QGQRLTESYA GRTLSLSLFA LTLGLSQPPR DFGVTSYSTQ LLPDWMETLA CYADGKALMA GEPAERMPPL AIADYAAIDS GVPSPPFVLS VVGPDQIANW SGLDQDDYRA KRGRWQQAIV AHLDRNYPGL AGAVTAASFN VALSVQQYLN VPQGSVYGFA PLPPNDSGAP YRSPRTVLPG LYLSSAYAGL GGYSGVVQAA AACADAILRD GPTS
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