| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1747 |
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| Symbol | |
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| ID | 3909734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1995904 |
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| End bp | 1997589 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883641 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_485366 |
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| Protein GI | 86748870 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03205] dicarboxylate--CoA ligase PimA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0225164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC CCGGTGAGCA GTACTATCCG CCCGGCGTTC GCTGGGATGC GGAGATCGCG
AAGGGCACGT TGCCCGATCT CCTGGCGAAG GCGGCGACCG ACTACGCGGC GCGGCCGGCG
CTGGAATTCC GCGACGGCCA GATAAATTAC GCCGGGCTGC AGGAACGCGC CGACATCGCC
GCCGCAGCCC TGCTGCGCGC CGGCTACGGC CCCGGCGCTT CGGTCGCTCT GTTTCTCGGC
AACACGCCGG ATCACCCGAT CAACTTCTTC GGCGCGCTGA AGGCCGGCGC CCGCGTTGTG
CATCTGTCGC CGCTCGACGG CGAGCGGGCG CTGTCGCACA AGCTCAGCGA TTCCGGCGCG
CGCGTGCTGA TCACCACCGA TTCCGCAGCA TTGCTGCCGA TGGCGCTGAG GTTCCTCGAC
AAGGGTCTGC TCGATCGCCT GATCGTCTGC GCCGACTCAG ATTGGGGCGC ATCGGCCACG
CCGCTCGCCC CATTGCCGGA CGATCCGCGC GTGATCCGCT ACGCCGACTT CATCGAAGGC
CCTGCGAAGC CCGCCGCATG GCCGCAGATC TCGCCCGACG ACATCGCGCT CCTGCAATAC
ACCGGCGGCA CCACCGGCCT GCCCAAGGGC GCGATGCTGA CTCACGCCAA TCTCACCTCG
GCGGTGTCGA TCTACGACGT CTGGGGCCTG GTGCGCGCGG GCGAGGGCGG CGCGCATCGC
GTGATCTGCG TGCTGCCGCT GTTTCACATC TACGCGCTGA CCGTGATCCT GCTGCGCTGT
CTGAAGCAGG GCGACCTGAT CTCGCTGCAT CAGCGCTTCG ACGTCGCCGC GGTGTTCCGC
GACATCGAGG AGAAGCGCGC CACGGTGTTC CCCGGCGTGC CGACGATGTG GATCGCGCTC
GCCAACGATC CGTCGCTGGA GAGCCGCGAT CTGTCGTCGC TGACGATGGC CGGCTCCGGC
GGCGCGCCGC TGCCGGTCGA GGTCGCGCGA TTGTTCGAGC GCAAGACCAA TCTCAAACTC
AAGAGCGGCT GGGGCATGAC CGAGACCTGC TCGCCCGGCA CCGGCCATCC GCCGGACGGG
CCCGACAAGC CGGGCTCGAT CGGGCTGATG CTGCCGGGGA TCGAACTCGA CGTCGTCGCG
CTCGACGATC CGAAGAAGGT TCTGCCGCCC GGCGAAGTCG GCGAGATCCG GGTCCGCGGT
CCCAATGTCA CCCAGGGCTA CTGGAACCGG GCGCAGGAAA CCGCGGAGTC GTTCGTCGGT
GACCGTTTTC TCACCGGCGA TATCGGCTAT ATGGACTCCG ACGGCTATTT CTTCCTGGTC
GACCGCAAGA AGGACATGAT CATTTCGGGA GGATTCAACG TCTACCCGCA GATGATCGAA
CAAGCGATCT ATGAACATCC GGCGGTGCAG GAAGTGATCG TGATTGGCAT CCCCGACGAT
TATCGCGGCG AGGCGGCGAA GGCGTTCGTC AAGCTGCGCG ACGGCGCGAA GCCTTTCAGC
GTCGAGGAGC TGCGCGATTT CCTCAAGGGC AAACTCGGCA AGCACGAGCT GCCCGCCGCG
GTCGAGTTCG TCGACGAATT GCCGCGCACC CCGGTCGGCA AACTCTCGCG CCACGAACTG
CGCAATCAGC TACCCAAATC CACCAACCAG AGCCAACAGC AAACCGCACA GGGAGTCCGC
CCATGA
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| Protein sequence | MTHPGEQYYP PGVRWDAEIA KGTLPDLLAK AATDYAARPA LEFRDGQINY AGLQERADIA
AAALLRAGYG PGASVALFLG NTPDHPINFF GALKAGARVV HLSPLDGERA LSHKLSDSGA
RVLITTDSAA LLPMALRFLD KGLLDRLIVC ADSDWGASAT PLAPLPDDPR VIRYADFIEG
PAKPAAWPQI SPDDIALLQY TGGTTGLPKG AMLTHANLTS AVSIYDVWGL VRAGEGGAHR
VICVLPLFHI YALTVILLRC LKQGDLISLH QRFDVAAVFR DIEEKRATVF PGVPTMWIAL
ANDPSLESRD LSSLTMAGSG GAPLPVEVAR LFERKTNLKL KSGWGMTETC SPGTGHPPDG
PDKPGSIGLM LPGIELDVVA LDDPKKVLPP GEVGEIRVRG PNVTQGYWNR AQETAESFVG
DRFLTGDIGY MDSDGYFFLV DRKKDMIISG GFNVYPQMIE QAIYEHPAVQ EVIVIGIPDD
YRGEAAKAFV KLRDGAKPFS VEELRDFLKG KLGKHELPAA VEFVDELPRT PVGKLSRHEL
RNQLPKSTNQ SQQQTAQGVR P
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