| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1734 |
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| Symbol | |
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| ID | 3908259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1980211 |
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| End bp | 1981380 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883628 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_485353 |
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| Protein GI | 86748857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.169236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0172136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGA TCAACCGCGT CGCCGACCTG CAACCCGATA TCATGGCCTG GCGTCACGAC
CTCCATCAGC ACCCCGAACT GATGTACGAC GTCGACCGCA CCGCCGATTT CGTCGCCCAG
CGCCTGCGCG AATTCGGCTG CGACGAGGTG GTGACGGGAC TCGGCCGCAC CGGCGTGGTC
GGTGTGATCC GCGGCCGCAA GCCGGCGAGC GGCGACCTCA AGGTGATCGG GCTGCGCGCC
GACATGGACG CGCTGCCGAT CGAGGAGGCG ACCGGTCTAC CCTATGCCTC CAAGGTGCCC
GGCAAGATGC ACGCCTGCGG CCATGACGGC CACACCGCGA TGCTGCTCGG CGCCGCGCGC
TATCTCGCCG AGACCCGCAA TTTCGCAGGC AGTGTAGTGG TGATCTTCCA GCCGGCCGAG
GAGGGCGGCG CGGGGGCCGC GGCGATGATC AAGGACGGGC TGATGGACCG CTTCGGCATC
GAGCAGGTCT ACGGCATGCA CAACGGCCCC GGCATCCCGG TCGGCTCCTT CGCCATCAGC
CCGGGCGCGA TCATGGCCTC GACCGATTCG GTCGACATCC GCATCGAGGG CGTCGGCGGC
CACGCCGCGC GGCCGCATAT GTGCGTCGAC TCGGTGCTGG TGGGCGCCCA GCTCGTCACC
GCGCTGCAGT CGATCGTGTC GCGCACGGTC GATCCGCTGG AATCGGCGGT GATCTCGATC
TGCGAATTCC ACGCCGGCAA CGCCCGCAAC GTCATCCCGC AGATCGCCGA ACTGAAAGGC
ACGGTCCGCA CCCTGAAGGC CGAAGTTCGC GACCTGGTCG AGAAGCGCAT CCACGAGGTC
GCGGCCGGCG TTGCGCAGTC GACCGGCGCC AGGATCGACA TCGTCTACGA GCGCGGCTAC
CCGGTGGTGG TCAACCATGC CGAGCAGACC GAGGTGGCGC AGCGGATCGC CCGCGACATC
GCCGGCGAGT CCAACGTGAC GTCGATGCCG CCGCTGATGG GCGCCGAGGA TTTCGCCTAT
ATGCTGGAAG CGCGGCCGGG CGCGTTCATC TTCCTCGGCA ATGGCGACAG CGCCGGGCTG
CATCACCCGG CCTACAACTT CAACGACGAC GCCATCGTCT ACGGCACCTC GTACTGGATC
AAACTGGTCG AGAACCAACT CGCGGCGTGA
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| Protein sequence | MPLINRVADL QPDIMAWRHD LHQHPELMYD VDRTADFVAQ RLREFGCDEV VTGLGRTGVV
GVIRGRKPAS GDLKVIGLRA DMDALPIEEA TGLPYASKVP GKMHACGHDG HTAMLLGAAR
YLAETRNFAG SVVVIFQPAE EGGAGAAAMI KDGLMDRFGI EQVYGMHNGP GIPVGSFAIS
PGAIMASTDS VDIRIEGVGG HAARPHMCVD SVLVGAQLVT ALQSIVSRTV DPLESAVISI
CEFHAGNARN VIPQIAELKG TVRTLKAEVR DLVEKRIHEV AAGVAQSTGA RIDIVYERGY
PVVVNHAEQT EVAQRIARDI AGESNVTSMP PLMGAEDFAY MLEARPGAFI FLGNGDSAGL
HHPAYNFNDD AIVYGTSYWI KLVENQLAA
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