| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1663 |
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| Symbol | |
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| ID | 3908650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1892458 |
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| End bp | 1893654 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883557 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_485282 |
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| Protein GI | 86748786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.596073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG TCGCACGACT GGCTTTGACG GCACTGCTTT TCGCCTCCGG CGCTGCCTAT
GCGCAGCAAG GCGAGATCAA GGTGGGAGAG ATCAACTCCT ATTCGGCACT CCCCGGCTTC
ACCGAGCCAT ACCGCAAGGG CATGGAACTG GCGCTGAAGC AGATCAACGA TGCCGGCGGC
ATCAAGGGCA AGAAGCTCGT CGTCATCACC AAGGACGACG GCGGCAAGCC GGGCGACGCG
CTGACCGCCG CCAACGAGCT GGTGTCGCGC GACGGCGTGG TGATGATCGC CGGCGGCTTC
CTGTCGAATA TCGGCCTGGC GCTGTCCGAC TTCGCCAAGC AGAAGAAGGT GCTCTACGTC
GCCGCCGAGC CGCTGACCGA CGCCATCGTC TGGTCGAAGG GCAACGACTA TACTTTCCGG
CTGCGCACAT CGAACTATAT GCAGGCCTCG ATGCTGGCGG AGGAAGCCGC CAAGCTGCCG
GCCAAGAAGT GGGCGACGAT TGCGCCCAAC TACGAATTCG GCCAGTCGTT CGTCGCCGCG
TTCAAGGAGA TTCTCAGCAA GAAGCGTCCC GACGTCGAGT TCGTCGCCGA GCAATGGCCG
CCGCTGAACA AGATCGACGC CGGCCCGGTG CTGCAGGCGA TCGACGCCGC CAAGCCCGAC
GCCATCCTCA ACGCCACCTT CGCCGGCGAC CTGGTCAAGC TGGTGCGCGA GGGCAATACC
CGCGGCGTGT TCAAGGATCG CGCGGTGGTG AGCTATCTCA CCGGCGAGCC GGAATATCTC
GACCCGCTGA AGACCGAAAC GCCGGAGGGC TGGATCGTCA CCGGCTATCC CTGGTACGCG
ATCAGCACGC CGGAGCATCA GGCTTTCCTC GACGCTTACC AACAGCTCAA CAAGGACTAT
CCGCGGCTCG GCTCGGTGGT CGGCTACGCC ACCGTGAAGA CCATCGCCGC CGTGCTGACC
GCCACCGACG ATCACTCCAC CGACGGCCTG GTCAAGGCGA TGAAGAACCT GAAGGTCGAC
ACCCCGTTCG GCGCGGTCGT CTACCGCGCC GGCGATCATC AGTCGACGAT GGGCGCCTAT
GTCGGCAAGA CCACGCAGAA GGACGGCAAG GGCATCATGA CCGACATCAA GTTCAAGAAG
GGCGCCGACT ATCTACCGCC CGAGGCCGAG GCCGCCAAGC TGCGTCCGGC GAACTGA
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| Protein sequence | MKHVARLALT ALLFASGAAY AQQGEIKVGE INSYSALPGF TEPYRKGMEL ALKQINDAGG
IKGKKLVVIT KDDGGKPGDA LTAANELVSR DGVVMIAGGF LSNIGLALSD FAKQKKVLYV
AAEPLTDAIV WSKGNDYTFR LRTSNYMQAS MLAEEAAKLP AKKWATIAPN YEFGQSFVAA
FKEILSKKRP DVEFVAEQWP PLNKIDAGPV LQAIDAAKPD AILNATFAGD LVKLVREGNT
RGVFKDRAVV SYLTGEPEYL DPLKTETPEG WIVTGYPWYA ISTPEHQAFL DAYQQLNKDY
PRLGSVVGYA TVKTIAAVLT ATDDHSTDGL VKAMKNLKVD TPFGAVVYRA GDHQSTMGAY
VGKTTQKDGK GIMTDIKFKK GADYLPPEAE AAKLRPAN
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