Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1625 |
Symbol | |
ID | 3909902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1831357 |
End bp | 1832559 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883520 |
Product | major facilitator transporter |
Protein accession | YP_485245 |
Protein GI | 86748749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.571232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.606399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCCCG AATCACAAAT CCCCACCAGA ACAAGGGCTC CGAAGCGATT CGCGATCGGG CTCGCGGTAT TCTATGCGAC GGTGTTCGGC GTCGTCGGGA CCTATCTGCC CTTCTTCACC GTATGGCTGA AAGCGATCGG GATCGAGCCC TTCTGGATCG GCGTGATCGT GGCGATGCCG GCGATCACCC GCTTCACGGT GCTGCCGTTC ATCACCGCGG AGGCGGAGCG GCGCCACGCG CTGCGACCGG CACTTGTTAT CACAGCCATC GTCACCACGC TCGGCTTTGT CTGCCTCGGG GTGCTACGAG GCCCGCTGGC GATTCTCGCG GTGTTCGTGG TCACCGCCTG TGCCTGGACG CCGATGGTGC CGCTGACCGA CGGCTACGCG CTGAAGGCGG TGAGGCGGTT CGGCCTGAAC TACGGGCCGC TGCGATTGTG GGGCTCCGCC GCCTTCGTCG TCGGGGCGGT GGTGAGCGGC GTGCTGGCCG ACATCATCGC ACCCGAGCAT CTGATCTGGG TGATCGCGGC CTCCGCCGGA CTCGGCGTGA TCGCCGCCTT CGGATTGCAG CCGCTCGACG CCCCGGGCGC GCACCCGGCG CCGCCCGCGC GCCGGGTGGC GTTGCTGCGC AACCCGGCCT TTCTGGCGAT CATCATTGCC GGCGGGCTGA TCCAGGGCAG CCATGCGGCG TACTACGCGT TCGGCTCGAT CGTCTGGCAG GGGGCGGGCT ACAGCGGCAT GACGATCGCG AGCCTGTGGA TCCTCGGCGT GCTCGCCGAG ATCGTGGTGT TCGCGCTGTC GCCGCGCATC ACGCTGTCGC CGGCGCTGAT GATGCTGGGC GGCGCGCTCG GTGCCGTGCT GCGCTGGCTG ATCACCGCGC AGGATCCGCC GCTCGCCGTT CTCCTCCCGG TGCAGTTGCT GCACGGGTTG AGCTTCGGGC TGACGCAACT CGGCACCATG GGGCTGCTGG TGCGCCACGC CCCGGGTCAT CTCATCGCCC GGGCGCAGGG CTACTACGCG GCCTGTTCAG GTCTGGCGAT GAGCAGCGCC GCGATGCTCT CCGGCCTGCT GTTCGCGCGC TGGGGCCTCG CCGTCTACGA TCTGATGGCG GCGGTGGCGC TGATCGGCGC GGTGGTGGTC GTTGCGATGC GTCGCCGCCT CGACACGCAC GATCAGCCCC ACAACGAGGG CTCCGGCGGA TAG
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Protein sequence | MSPESQIPTR TRAPKRFAIG LAVFYATVFG VVGTYLPFFT VWLKAIGIEP FWIGVIVAMP AITRFTVLPF ITAEAERRHA LRPALVITAI VTTLGFVCLG VLRGPLAILA VFVVTACAWT PMVPLTDGYA LKAVRRFGLN YGPLRLWGSA AFVVGAVVSG VLADIIAPEH LIWVIAASAG LGVIAAFGLQ PLDAPGAHPA PPARRVALLR NPAFLAIIIA GGLIQGSHAA YYAFGSIVWQ GAGYSGMTIA SLWILGVLAE IVVFALSPRI TLSPALMMLG GALGAVLRWL ITAQDPPLAV LLPVQLLHGL SFGLTQLGTM GLLVRHAPGH LIARAQGYYA ACSGLAMSSA AMLSGLLFAR WGLAVYDLMA AVALIGAVVV VAMRRRLDTH DQPHNEGSGG
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