Gene RPB_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1561 
Symbol 
ID3908760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1759963 
End bp1760811 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID637883457 
ProductABC transporter related 
Protein accessionYP_485182 
Protein GI86748686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGG GAGGAACGGG TTTGGAACAC GCGTTGGAAG TGCGCAATGT GTCCTTGCGT 
TTCGGCGGCG TCCGCGCGCT GAGCGAGGTC AGCTTCGCCG TGAACGACGG CGAGCTGTTT
TCCATCATCG GCCCCAACGG CGCCGGCAAG ACCTCGATCG TCAACTGCAT CTCCGGCCGT
TACCGGCCGA CCGAAGGCCA GCTGTTCTAC CACGGCCGCG ACATCACCGG CCTCAAGCCG
AACGCCCGCG CCCCGCTCGG CATCGGCCGC ACCTTCCAGA ATCTCGCGCT GTTCCACCAC
ATGAGCGTGC TCGACAACAT CATGGTCGGG CGCCATCACC TTCTGAAAAA CAACTTCTTC
ACCGGCGCGC TGTACTGGCT CGGCGCCCGG CGCGAGGAAC TCGAACATCG CCACAAGGTC
GAGGAGATCA TCGACTTCCT CGACCTGCAG TCGGTGCGCA AGGCGACCGC CGGCACCCTC
TCCTACGGCC TGCGCAAGCG CGTCGAGCTG GCGCGCGCGA TGGCGCTGGA GCCGAAGCTG
ATCCTGCTCG ACGAGCCGAT GGCCGGCATG AACTTCGAAG AGAAGGAGGA CATGGCCCGC
TACATCGTCG ACCTCAACGA AGAGTTCGGC ATGACGGTGG TGATGATCGA GCACGACATG
GGCGTGGTGA TGGACATCTC CAATCGCGTG GTGGTGCTGG ATTTCGGCCG CAAGATCGCC
GAGGGCGAGC CGGCCGAGGT GCTGGCCGAT CCGCACGTCA AGCGCGCTTA TCTCGGCGAG
GAGGACGAGG TGCTGGTCGA TCCGGACGAC ATGCCCAGCC ATCCGAGCAC TGCGGAGCAT
GTCGCATGA
 
Protein sequence
MTGGGTGLEH ALEVRNVSLR FGGVRALSEV SFAVNDGELF SIIGPNGAGK TSIVNCISGR 
YRPTEGQLFY HGRDITGLKP NARAPLGIGR TFQNLALFHH MSVLDNIMVG RHHLLKNNFF
TGALYWLGAR REELEHRHKV EEIIDFLDLQ SVRKATAGTL SYGLRKRVEL ARAMALEPKL
ILLDEPMAGM NFEEKEDMAR YIVDLNEEFG MTVVMIEHDM GVVMDISNRV VVLDFGRKIA
EGEPAEVLAD PHVKRAYLGE EDEVLVDPDD MPSHPSTAEH VA