Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1561 |
Symbol | |
ID | 3908760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1759963 |
End bp | 1760811 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883457 |
Product | ABC transporter related |
Protein accession | YP_485182 |
Protein GI | 86748686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGGG GAGGAACGGG TTTGGAACAC GCGTTGGAAG TGCGCAATGT GTCCTTGCGT TTCGGCGGCG TCCGCGCGCT GAGCGAGGTC AGCTTCGCCG TGAACGACGG CGAGCTGTTT TCCATCATCG GCCCCAACGG CGCCGGCAAG ACCTCGATCG TCAACTGCAT CTCCGGCCGT TACCGGCCGA CCGAAGGCCA GCTGTTCTAC CACGGCCGCG ACATCACCGG CCTCAAGCCG AACGCCCGCG CCCCGCTCGG CATCGGCCGC ACCTTCCAGA ATCTCGCGCT GTTCCACCAC ATGAGCGTGC TCGACAACAT CATGGTCGGG CGCCATCACC TTCTGAAAAA CAACTTCTTC ACCGGCGCGC TGTACTGGCT CGGCGCCCGG CGCGAGGAAC TCGAACATCG CCACAAGGTC GAGGAGATCA TCGACTTCCT CGACCTGCAG TCGGTGCGCA AGGCGACCGC CGGCACCCTC TCCTACGGCC TGCGCAAGCG CGTCGAGCTG GCGCGCGCGA TGGCGCTGGA GCCGAAGCTG ATCCTGCTCG ACGAGCCGAT GGCCGGCATG AACTTCGAAG AGAAGGAGGA CATGGCCCGC TACATCGTCG ACCTCAACGA AGAGTTCGGC ATGACGGTGG TGATGATCGA GCACGACATG GGCGTGGTGA TGGACATCTC CAATCGCGTG GTGGTGCTGG ATTTCGGCCG CAAGATCGCC GAGGGCGAGC CGGCCGAGGT GCTGGCCGAT CCGCACGTCA AGCGCGCTTA TCTCGGCGAG GAGGACGAGG TGCTGGTCGA TCCGGACGAC ATGCCCAGCC ATCCGAGCAC TGCGGAGCAT GTCGCATGA
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Protein sequence | MTGGGTGLEH ALEVRNVSLR FGGVRALSEV SFAVNDGELF SIIGPNGAGK TSIVNCISGR YRPTEGQLFY HGRDITGLKP NARAPLGIGR TFQNLALFHH MSVLDNIMVG RHHLLKNNFF TGALYWLGAR REELEHRHKV EEIIDFLDLQ SVRKATAGTL SYGLRKRVEL ARAMALEPKL ILLDEPMAGM NFEEKEDMAR YIVDLNEEFG MTVVMIEHDM GVVMDISNRV VVLDFGRKIA EGEPAEVLAD PHVKRAYLGE EDEVLVDPDD MPSHPSTAEH VA
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