Gene RPB_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1542 
Symbol 
ID3908741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1737800 
End bp1738912 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content56% 
IMG OID637883438 
Productacyltransferase 3 
Protein accessionYP_485163 
Protein GI86748667 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.244939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CGCCATACCG AGCGCTGGGC GGCTTCCGCT TCGCTCTAGC AGCTGCCGTC 
GTGCTGAGTC ACACTTGGTT TCTGAGCTTC ACGGACAGAC GCTTCGTTCA GGACCTCGGG
ATCGGCAACG TCGCGGTGAT GGGCTTCTTC GTGCTGTCCG GGTTCATCAT CTCCGAGGCG
GTTGATTTCT TCTATCGAGA TCGTCCGGCA GCGTTCCTGA GCAACAGGTT TCTCAGATTG
GCGCCTCCCT ATTGGGTCGC CGCCGCCCTC TCGATTGCCG TGCACTGGGC GTTGTTGAAT
GCCTGGACGC TGAGATTGCC GGACTATTCG TCGAACCCGA GCAACATGTT CGACATGCGC
AATCTCGCAG TCCAGATCAC CGGAATATTC CCGATCTTCA ATGTCAACCA GTTTCTCCCG
CGGGAGGAAT GGTACTACTT CGTTCGCTTT GCCTGGGCCA TTTTCGTCGA GTTCGTATTT
TATTATTGCG TCGCAATCTG CATCGCCCTT TGGCCGATCG CGAGAAGAAT CGTCGGCATG
CGAGCCTATC TCGCTTCGAT CGCGGCCGGG GCCATCGGCC TGCATGTTTT CAGCGAGTAC
GTTCGTCACC TTCACACGAG CTTCGCTTTT TTTCCCTACT TCGTTCTTGG CACGAGCATC
TATCTGCGCA AGGTGTATCG CGATACGCTC GCCAGCGGGG TGATGGTCGT TTCTTATATT
CTGATCGCCA TCCACTTTCT TCGCTACACG CAGGGTCAGC TTTCGCTGCA CGTCGACTGG
TGGAGCGGCG CGGTTCGGCC CGTCGTGTTC ATCCCCACCC TGGCAATGTT GGCTGTGCCG
TTCCTGCTCG CATGGATATC GACAATTCGT CTTTCTGCGA ACTGGATAAA GCTCGATCAA
TCGCTGGGCG ATCTGACTTA CCCGCTGTAT CTGAATCACT ATGCCGTCTT GGTTGCGGCC
TATTCTTTGT TTCCGGAGCC CAACCCGATC GTTCAAATTC TCACGGTGGC GATATCAATC
GTTGCATCAT ACGTCTTGCA GGTCTTGGTC GAGGGGCCGA TGTCGAGACT GAGAGACCGG
ATCAGGGGGC GGCGTCTCGT CGTGCCGCGG TGA
 
Protein sequence
MKDAPYRALG GFRFALAAAV VLSHTWFLSF TDRRFVQDLG IGNVAVMGFF VLSGFIISEA 
VDFFYRDRPA AFLSNRFLRL APPYWVAAAL SIAVHWALLN AWTLRLPDYS SNPSNMFDMR
NLAVQITGIF PIFNVNQFLP REEWYYFVRF AWAIFVEFVF YYCVAICIAL WPIARRIVGM
RAYLASIAAG AIGLHVFSEY VRHLHTSFAF FPYFVLGTSI YLRKVYRDTL ASGVMVVSYI
LIAIHFLRYT QGQLSLHVDW WSGAVRPVVF IPTLAMLAVP FLLAWISTIR LSANWIKLDQ
SLGDLTYPLY LNHYAVLVAA YSLFPEPNPI VQILTVAISI VASYVLQVLV EGPMSRLRDR
IRGRRLVVPR