Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1542 |
Symbol | |
ID | 3908741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1737800 |
End bp | 1738912 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637883438 |
Product | acyltransferase 3 |
Protein accession | YP_485163 |
Protein GI | 86748667 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.244939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG CGCCATACCG AGCGCTGGGC GGCTTCCGCT TCGCTCTAGC AGCTGCCGTC GTGCTGAGTC ACACTTGGTT TCTGAGCTTC ACGGACAGAC GCTTCGTTCA GGACCTCGGG ATCGGCAACG TCGCGGTGAT GGGCTTCTTC GTGCTGTCCG GGTTCATCAT CTCCGAGGCG GTTGATTTCT TCTATCGAGA TCGTCCGGCA GCGTTCCTGA GCAACAGGTT TCTCAGATTG GCGCCTCCCT ATTGGGTCGC CGCCGCCCTC TCGATTGCCG TGCACTGGGC GTTGTTGAAT GCCTGGACGC TGAGATTGCC GGACTATTCG TCGAACCCGA GCAACATGTT CGACATGCGC AATCTCGCAG TCCAGATCAC CGGAATATTC CCGATCTTCA ATGTCAACCA GTTTCTCCCG CGGGAGGAAT GGTACTACTT CGTTCGCTTT GCCTGGGCCA TTTTCGTCGA GTTCGTATTT TATTATTGCG TCGCAATCTG CATCGCCCTT TGGCCGATCG CGAGAAGAAT CGTCGGCATG CGAGCCTATC TCGCTTCGAT CGCGGCCGGG GCCATCGGCC TGCATGTTTT CAGCGAGTAC GTTCGTCACC TTCACACGAG CTTCGCTTTT TTTCCCTACT TCGTTCTTGG CACGAGCATC TATCTGCGCA AGGTGTATCG CGATACGCTC GCCAGCGGGG TGATGGTCGT TTCTTATATT CTGATCGCCA TCCACTTTCT TCGCTACACG CAGGGTCAGC TTTCGCTGCA CGTCGACTGG TGGAGCGGCG CGGTTCGGCC CGTCGTGTTC ATCCCCACCC TGGCAATGTT GGCTGTGCCG TTCCTGCTCG CATGGATATC GACAATTCGT CTTTCTGCGA ACTGGATAAA GCTCGATCAA TCGCTGGGCG ATCTGACTTA CCCGCTGTAT CTGAATCACT ATGCCGTCTT GGTTGCGGCC TATTCTTTGT TTCCGGAGCC CAACCCGATC GTTCAAATTC TCACGGTGGC GATATCAATC GTTGCATCAT ACGTCTTGCA GGTCTTGGTC GAGGGGCCGA TGTCGAGACT GAGAGACCGG ATCAGGGGGC GGCGTCTCGT CGTGCCGCGG TGA
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Protein sequence | MKDAPYRALG GFRFALAAAV VLSHTWFLSF TDRRFVQDLG IGNVAVMGFF VLSGFIISEA VDFFYRDRPA AFLSNRFLRL APPYWVAAAL SIAVHWALLN AWTLRLPDYS SNPSNMFDMR NLAVQITGIF PIFNVNQFLP REEWYYFVRF AWAIFVEFVF YYCVAICIAL WPIARRIVGM RAYLASIAAG AIGLHVFSEY VRHLHTSFAF FPYFVLGTSI YLRKVYRDTL ASGVMVVSYI LIAIHFLRYT QGQLSLHVDW WSGAVRPVVF IPTLAMLAVP FLLAWISTIR LSANWIKLDQ SLGDLTYPLY LNHYAVLVAA YSLFPEPNPI VQILTVAISI VASYVLQVLV EGPMSRLRDR IRGRRLVVPR
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