Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1497 |
Symbol | |
ID | 3908810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1691532 |
End bp | 1692494 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883392 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_485118 |
Protein GI | 86748622 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.726919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.257392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCGGAG CCGGCATGAA TTCGATCGTC TCCCCCGAAG ACGGATTGTC GCCCGACGCA GCCCCGGTGT CGGCCGAAGC GCCGTGGCGC GGGACGCTGC GCCGCCTGCT GCGGCACTCC GGAGTCCAGA TCGGCGGCCT CCTGTTCCTG CTGATCGTGC TGATCGCCGT CTTCGCCCCC TATCTCTACA CGATCGACCC CGCATCGATG GATCCGATGC TGGTCAGCAT TCCGATCGGA ACGAGTACGA CCTTCACCGA TCTGTCCGGC GACTCGTTCG CGCACTACTT CGTGTTCGGC ACGGACAGTA TGGGTCGCGA CGTCTACAGC CGTGTCGTTT ACGGCGCGCG GATCTCGCTG ACCGTGGGGG CCTCTGTGGC CGCGGCGAGC ATCGTCGTCG GCTGTTTGAT CGGCCTGTTC GCAGGCTATG TCCGACGCCT CGACGGCCCG TTGATGCGCG TCATGGACGG TCTGATGGCG GTTCCTTCGA TCCTGCTCGC CATCGCCCTC GTGTCGCTGT GGAACGTGTC GCTGACGACG CTGGTGATCG CCATCGCCAT TCCCGACCTT CCCCGGGTGG CGCGCGTGGT GCGTGCGACG GTTTTGTCGG TCAAGACGAT CGCCTTCGTG GAGGCCGCCC GGATGATGTG TACGCCGTGG TGGAAGATCA TGTGGCGACA CATCCTCCCT GCCGTGATGG CGCCGCTCGC GATCCAGGGA ACGTTCATTT TCGGCTCGGC GATTCTGGTC GAAGCGGTTC TCTCTTTCCT CGGCGTCGGC TTCACCAGCG ACGTGCCGAC CTGGGGCAAT GTGATGGCCG ACGGCCGTGT CAATTTCAAC CTGGCGCCGC ATCTCGTCCT CATCCCCGGT GCGTTCCTGG CGGTGACCAT CGTCGCCATC AACATGATCG GCGACGGCCT GAGAGACGTG CTCGATCCCA AATACGCACC GGTCGAAAGC TGA
|
Protein sequence | MSGAGMNSIV SPEDGLSPDA APVSAEAPWR GTLRRLLRHS GVQIGGLLFL LIVLIAVFAP YLYTIDPASM DPMLVSIPIG TSTTFTDLSG DSFAHYFVFG TDSMGRDVYS RVVYGARISL TVGASVAAAS IVVGCLIGLF AGYVRRLDGP LMRVMDGLMA VPSILLAIAL VSLWNVSLTT LVIAIAIPDL PRVARVVRAT VLSVKTIAFV EAARMMCTPW WKIMWRHILP AVMAPLAIQG TFIFGSAILV EAVLSFLGVG FTSDVPTWGN VMADGRVNFN LAPHLVLIPG AFLAVTIVAI NMIGDGLRDV LDPKYAPVES
|
| |