Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1489 |
Symbol | |
ID | 3908802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1678627 |
End bp | 1679925 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883384 |
Product | peptidase M20 |
Protein accession | YP_485110 |
Protein GI | 86748614 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0188879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.859959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA TACTGCCTGC TGTCACCGCC GACATCGAAG CCGATGTGCT GTCGCGGATC ACCGAGGAAC GCTGGCTGAC GCTGGCCAGT GAACTGATCA CCACCGGCCA GCCGCGCGCC ACCAACCCAC TCGATCCCGA TTTGCCGGCC GCCGAGGAGG AAGCGATCGC GATGCTGATC GCCGGCAAGC TCGAAGCGCT CGGCATGGCG GTGACCAAGC ATGCGGCGCA GCCGCACCGA CCGAACATTC TGGGCGTGCT GCCAGGCCGC AAGGATGCGC CGTCGCTGAT CCTCAACGAT CACCTCGACA CCTATCCGGC GGTGGAGCCG GAGAAGTGGC ACATGACCGG CTTCGATCCG TTCAAGCCGA CCCGGCATGG CGACCTGCTC TATGCCCGCG GCACCTCCGA CACCCGCGGC AACCTCGCCG CCTCACTGCT CGCCGTCCAG GCGCTGATCG AGGCCGGCGT CCGCTTCGAT GGCACGCTGA TGTGCTGCTA CACGGTCGAC GAGGAGCGCA ACGGCACGGA GGGCTCGATC TATATGCTGC AGCAGGTCGG CCTCACCGCC GACTATTCGA TCACCGCGGA GCCGACCGCC TGGGGCGATG TCTCCGGCGA CTGGGGCATG AACCTGTCCG TCGCAAATTC GGGTCACTGC CTGATCGAAA TCGTCGTTCA GGGCATCAAG TCGCATATCT GGCGGCCCGA CATCAGCGTC AACGCCATCA TGGCGGCCGG CAAATTGCTG CCGCAACTGC AGGCGATGGC GTTCACGCAT GTGCCGGCGG CGTTCATGGG CCACACCCCG CCGTGCTGTT CGGTGGTGCG AATCCGCGGC GGGCTGCCCG GCGAGATGCA GTTTTCGCCG GACGCCTGCA CCATCACGGT GGCGGCGGTC GGGCTGGTAC CGGGCATGAC GCTGGACAGT GTGATCGCCG ACATCGAGCA GACCATTCGC CAGACCTTTG CCTCGGTGAA CGACGTCACC GCAACCGTCC GGCAGGTGCC GGGCTCGCTG TTCGTCAACG GCACCGAGCC GGTGCCGGTC GATCAGGAGC CCTGCGTGTC GCTGCGCGCG GTGTATCGCG AGTTGATGGG CGCCGAGCCC GGCGTCAACC GCAAGAACGC CTTCAACGAC ACCATCCGGT TTCGCGAGGC CGGCATCAAT GCGGTGACCT TCGGCCCGGG CGAGGACGGC TGGGCCGTCG ACAACGAAAA CATCTCGATC ACCAAGGCGG TGATGGCGAC GCGGATCTAC GCGCTCTCCA TCATGCGGAT CCTGGGAGTG CGTGCATGA
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Protein sequence | MNMILPAVTA DIEADVLSRI TEERWLTLAS ELITTGQPRA TNPLDPDLPA AEEEAIAMLI AGKLEALGMA VTKHAAQPHR PNILGVLPGR KDAPSLILND HLDTYPAVEP EKWHMTGFDP FKPTRHGDLL YARGTSDTRG NLAASLLAVQ ALIEAGVRFD GTLMCCYTVD EERNGTEGSI YMLQQVGLTA DYSITAEPTA WGDVSGDWGM NLSVANSGHC LIEIVVQGIK SHIWRPDISV NAIMAAGKLL PQLQAMAFTH VPAAFMGHTP PCCSVVRIRG GLPGEMQFSP DACTITVAAV GLVPGMTLDS VIADIEQTIR QTFASVNDVT ATVRQVPGSL FVNGTEPVPV DQEPCVSLRA VYRELMGAEP GVNRKNAFND TIRFREAGIN AVTFGPGEDG WAVDNENISI TKAVMATRIY ALSIMRILGV RA
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