Gene RPB_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1422 
Symbol 
ID3908372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1609995 
End bp1610453 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID637883316 
Producthypothetical protein 
Protein accessionYP_485043 
Protein GI86748547 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAAG AGGGGCTGAC GATGAAGACA TACGCCTACG CCGCGGAGTT CGAAGCGGGA 
GATCGCAAGG GGACGATCGT CGTGAGCTTT CCCGACGTTC CGGAAGCGAT CACCCAAGGT
GACGATATCG CGGATGCCCG CGCGCAGGCG GAGGAGGCGT TGGGTCTGGC GCTGCTGAGC
TATCCGCAGC GCGAACTGCC ACTGCCGAAG GTCAAGGCGA AGGGCAAGGG CGCGACCATG
ATCGCGGTTG CGGCGGACGT CGCTGCCAAG CTCGCTGTGC TCGAGGCGTT TGCGGTCGCC
GGCATCAGCA AGAGCGAATT CGCGCGCCGC ATGAACAAGG ATGAGAAAGA GGTTCGCCGA
ATCCTCGATC CCAAGCACCC GACCAAGCTA CCCGCGATGG TCCAGGCGCT ACGTGCGCTG
GGCAAGCGCC TGGTGGTCGG GATCGAGGAA GCAGCCTGA
 
Protein sequence
MPEEGLTMKT YAYAAEFEAG DRKGTIVVSF PDVPEAITQG DDIADARAQA EEALGLALLS 
YPQRELPLPK VKAKGKGATM IAVAADVAAK LAVLEAFAVA GISKSEFARR MNKDEKEVRR
ILDPKHPTKL PAMVQALRAL GKRLVVGIEE AA