| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1408 |
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| Symbol | |
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| ID | 3908358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1599501 |
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| End bp | 1600346 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883302 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_485029 |
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| Protein GI | 86748533 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCAA ATAGCGGCGC GCAGCCGTTT TTGCAGACGA TCGAACAGGA GCAGATGATG
ACGAACCTCA CGGGCAAGAC CGCGGTCGTG ACCGGCTCGA CCTCGGGCAT CGGCCTCGCT
TACGCGCGCG CCTTCGCCAA GGCCGGCGCC AATGTGGTGT TGAACGGCAT GGGCGAGGCG
GACGCGATCG AAAAGGAGCG CAAGGCGATC GAGACCGATT TCGGCGTGAA GGCGGTGTAT
TCGCCGGCCG ACATGCTGAA GCCCGCCGAG ATCGCCGAGA TGGTCGGGCT CGGCGAGACG
ACGTTCGGCT CGGTCGACAT CCTGGTCAAC AACGCCGGCA TTCAGTTCGT CTCGCCGGTC
GAGGATTTTC CGATCGAGAA ATGGGACGCG ATCATCGGCA TCAACTTGTC GTCGGCGTTC
CACGGCATCC GCGCCGCGGT GCCGGGCATG AAGAAGCGCG GCTGGGGCCG CATCATCAAC
ACCGCCTCGG CCCACTCGCT GGTCGCCTCG CCGTTCAAGT CGGCCTATGT CGCCGCCAAG
CACGGCATCG CCGGCCTGAC CAAGACGGTG GCGCTCGAAG TCGCGACCCA CAAGATCACC
TGCAACTGCA TTTCGCCGGG CTATGTCTGG ACGCCGCTGG TCGAGAAGCA GATCCCCGAC
ACCATGAAGG CGCGCGGCCT CACCAAGGAG CAGGTGATCA ACGACGTGCT GCTGCTGGCT
CAACCGACCA AGCAGTTCGT CACCTCCGAG CAGGTCGCCG CCCTCGCGGT CTATCTGTGC
AGCGACGACG CCAGCCAGAT CACCGGCGCC AATCTGTCGA TGGACGGCGG CTGGACCGCG
GCGTAA
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| Protein sequence | MRSNSGAQPF LQTIEQEQMM TNLTGKTAVV TGSTSGIGLA YARAFAKAGA NVVLNGMGEA
DAIEKERKAI ETDFGVKAVY SPADMLKPAE IAEMVGLGET TFGSVDILVN NAGIQFVSPV
EDFPIEKWDA IIGINLSSAF HGIRAAVPGM KKRGWGRIIN TASAHSLVAS PFKSAYVAAK
HGIAGLTKTV ALEVATHKIT CNCISPGYVW TPLVEKQIPD TMKARGLTKE QVINDVLLLA
QPTKQFVTSE QVAALAVYLC SDDASQITGA NLSMDGGWTA A
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