Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1392 |
Symbol | |
ID | 3908342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1583289 |
End bp | 1583936 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883286 |
Product | hypothetical protein |
Protein accession | YP_485013 |
Protein GI | 86748517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.655126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCT CAATGTCAAA AGCCGTCGGG ATCGGCGCGG TGGCCATGCT GGCGCTGGCT GGCATGGCGT CCGGCGCGCA GGCGCAGGAT TTCTTCTCGG CGCTGTTTCA CGGCTTTCAA CCTCCCGCGC GCGGCTACGC GCCGGAGCGG GCGTTGCCGT TCGCCAGCGA GGGCGACTAC GCGCCACGGG CGCCTCGCGC GGCGCGACCT GCTTCGAGCG GGGGACAAGC CTATTGCGTC CGCACCTGTG ACGGCCGCTA TTTCCCGATT TCCGCGACCG GAGGCGAAAG CAAGGACGCG ACCTGCAACA GCTTCTGCCC GGCCAGCGAC ACCAAAGTGG TGTACGGCTC CAGCATCGAC GGCGCTCGGA CGTCAGCCGG AAAACCCTAT TCGGAATTGC CTAACGCCTT CAAATACCGA ACCGAGATCG TGGCGGGCTG CACCTGCAAC GGCAAGGATC AGTTCGGCCT TGCCAAGATC AAGATCGAGA ACGATCCGAC GGTGCGCAAG GGCGATATCG TCGCCAGCCA GGATGGCCTC AAAGTCGCCG GCCGGCCGGA CCGTCGCGAA GGGGCGCTGA ATTACTCGCC GGCGCCGGCA TCGATCCGAT CCGCCTACAG CCGCGTGCCG GTCGTCGCCG CGAACTGA
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Protein sequence | MRRSMSKAVG IGAVAMLALA GMASGAQAQD FFSALFHGFQ PPARGYAPER ALPFASEGDY APRAPRAARP ASSGGQAYCV RTCDGRYFPI SATGGESKDA TCNSFCPASD TKVVYGSSID GARTSAGKPY SELPNAFKYR TEIVAGCTCN GKDQFGLAKI KIENDPTVRK GDIVASQDGL KVAGRPDRRE GALNYSPAPA SIRSAYSRVP VVAAN
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