Gene RPB_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1392 
Symbol 
ID3908342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1583289 
End bp1583936 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID637883286 
Producthypothetical protein 
Protein accessionYP_485013 
Protein GI86748517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.655126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCT CAATGTCAAA AGCCGTCGGG ATCGGCGCGG TGGCCATGCT GGCGCTGGCT 
GGCATGGCGT CCGGCGCGCA GGCGCAGGAT TTCTTCTCGG CGCTGTTTCA CGGCTTTCAA
CCTCCCGCGC GCGGCTACGC GCCGGAGCGG GCGTTGCCGT TCGCCAGCGA GGGCGACTAC
GCGCCACGGG CGCCTCGCGC GGCGCGACCT GCTTCGAGCG GGGGACAAGC CTATTGCGTC
CGCACCTGTG ACGGCCGCTA TTTCCCGATT TCCGCGACCG GAGGCGAAAG CAAGGACGCG
ACCTGCAACA GCTTCTGCCC GGCCAGCGAC ACCAAAGTGG TGTACGGCTC CAGCATCGAC
GGCGCTCGGA CGTCAGCCGG AAAACCCTAT TCGGAATTGC CTAACGCCTT CAAATACCGA
ACCGAGATCG TGGCGGGCTG CACCTGCAAC GGCAAGGATC AGTTCGGCCT TGCCAAGATC
AAGATCGAGA ACGATCCGAC GGTGCGCAAG GGCGATATCG TCGCCAGCCA GGATGGCCTC
AAAGTCGCCG GCCGGCCGGA CCGTCGCGAA GGGGCGCTGA ATTACTCGCC GGCGCCGGCA
TCGATCCGAT CCGCCTACAG CCGCGTGCCG GTCGTCGCCG CGAACTGA
 
Protein sequence
MRRSMSKAVG IGAVAMLALA GMASGAQAQD FFSALFHGFQ PPARGYAPER ALPFASEGDY 
APRAPRAARP ASSGGQAYCV RTCDGRYFPI SATGGESKDA TCNSFCPASD TKVVYGSSID
GARTSAGKPY SELPNAFKYR TEIVAGCTCN GKDQFGLAKI KIENDPTVRK GDIVASQDGL
KVAGRPDRRE GALNYSPAPA SIRSAYSRVP VVAAN